RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 ARHGEF2Q92974 986 aaKnown RBP16.12■□□□□ 0.17
PLOD3-216ENST00000489927 IL12RB2Q99665 862 aa16.12■□□□□ 0.17
PLOD3-216ENST00000489927 DPH1Q9BZG8 443 aa16.12■□□□□ 0.17
PLOD3-216ENST00000489927 TCEAL2Q9H3H9 227 aaPredicted RBP16.12■□□□□ 0.17
PLOD3-216ENST00000489927 METTL5Q9NRN9 209 aaKnown RBP16.12■□□□□ 0.17
PLOD3-216ENST00000489927 DNAI1Q9UI46 699 aa16.12■□□□□ 0.17
PLOD3-216ENST00000489927 PNMA8BQ9ULN7 279 aaPredicted RBP16.12■□□□□ 0.17
PLOD3-216ENST00000489927 ENTPD2Q9Y5L3 495 aa16.12■□□□□ 0.17
PLOD3-216ENST00000489927 COL27A1Q8IZC6 1860 aaPredicted RBP16.12■□□□□ 0.17
PLOD3-216ENST00000489927 FLNBO75369 2602 aaKnown RBP16.11■□□□□ 0.17
PLOD3-216ENST00000489927 FAM72CH0Y354 149 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 TPP1O14773 563 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 MUSKO15146 869 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 CASC3O15234 703 aaKnown RBP16.11■□□□□ 0.17
PLOD3-216ENST00000489927 GCATO75600 419 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 GSRP00390 522 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 UGT2B4P06133 528 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 UCHL3P15374 230 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 RHOQP17081 205 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 ADRA1BP35368 520 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 ETFBP38117 255 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 MAPKAPK2P49137 400 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 GEMIN4P57678 1058 aaKnown RBP16.11■□□□□ 0.17
PLOD3-216ENST00000489927 RHDQ02161 417 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 NRG1Q02297 640 aaPredicted RBP16.11■□□□□ 0.17
PLOD3-216ENST00000489927 C1orf61Q13536 156 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 NR0B2Q15466 257 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 CDO1Q16878 200 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 C15orf59Q2T9L4 293 aaPredicted RBP16.11■□□□□ 0.17
PLOD3-216ENST00000489927 PRRT3Q5FWE3 981 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 LRRC73Q5JTD7 316 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 PERM1Q5SV97 790 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 FAM72AQ5TYM5 149 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 FAM72DQ6L9T8 149 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 RBM44Q6ZP01 1051 aaKnown RBP16.11■□□□□ 0.17
PLOD3-216ENST00000489927 FAM72BQ86X60 149 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 EPS8L1Q8TE68 723 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 BTN2A2Q8WVV5 523 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 CENPTQ96BT3 561 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 GRAMD1AQ96CP6 724 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 KLHL32Q96NJ5 620 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 SLC46A1Q96NT5 459 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 BOCQ9BWV1 1114 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 MAGEB5Q9BZ81 275 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 SPASTQ9UBP0 616 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 APOBEC3BQ9UH17 382 aaKnown RBP16.11■□□□□ 0.17
PLOD3-216ENST00000489927 NEU3Q9UQ49 428 aa16.11■□□□□ 0.17
PLOD3-216ENST00000489927 PMS2P1A4D2B8 440 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 F8VZ95 297 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 RIOK3O14730 519 aaKnown RBP16.1■□□□□ 0.17
PLOD3-216ENST00000489927 AREL1O15033 823 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 POP4O95707 220 aaKnown RBP16.1■□□□□ 0.17
PLOD3-216ENST00000489927 RBMS1P29558 406 aaKnown RBP16.1■□□□□ 0.17
PLOD3-216ENST00000489927 IGFALSP35858 605 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 THOP1P52888 689 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 ADKP55263 362 aaKnown RBP16.1■□□□□ 0.17
PLOD3-216ENST00000489927 UBE2HP62256 183 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 SNRPD1P62314 119 aaKnown RBP16.1■□□□□ 0.17
PLOD3-216ENST00000489927 PTK2BQ14289 1009 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 POLD3Q15054 466 aaPredicted RBP16.1■□□□□ 0.17
PLOD3-216ENST00000489927 MYLK3Q32MK0 819 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 ARL13BQ3SXY8 428 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 CCDC14Q49A88 953 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 ATXN7L2Q5T6C5 722 aaPredicted RBP16.1■□□□□ 0.17
PLOD3-216ENST00000489927 PHLDB2Q86SQ0 1253 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 VPS36Q86VN1 386 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 SLC35F3Q8IY50 421 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 PHACTR4Q8IZ21 702 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 TPCN2Q8NHX9 752 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 SLC20A1Q8WUM9 679 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 ARHGEF26Q96DR7 871 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 WBP1Q96G27 269 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 PRR11Q96HE9 360 aaPredicted RBP16.1■□□□□ 0.17
PLOD3-216ENST00000489927 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.1■□□□□ 0.17
PLOD3-216ENST00000489927 LRRC61Q9BV99 259 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 OSBPL1AQ9BXW6 950 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 TMEM248Q9NWD8 314 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 SSUH2Q9Y2M2 353 aa16.1■□□□□ 0.17
PLOD3-216ENST00000489927 CAPN8A6NHC0 703 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 PES1O00541 588 aaKnown RBP16.09■□□□□ 0.17
PLOD3-216ENST00000489927 RAMP2O60895 175 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 TCEA3O75764 348 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 LRIG2O94898 1065 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 SDC4P31431 198 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 RPIAP49247 311 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 PDX1P52945 283 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 SKOR1P84550 965 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 VAC14Q08AM6 782 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 DPCR1Q3MIW9 517 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 C6orf132Q5T0Z8 1188 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 TTC7BQ86TV6 843 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 GPT2Q8TD30 523 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 SNRNP27Q8WVK2 155 aaKnown RBP16.09■□□□□ 0.17
PLOD3-216ENST00000489927 RXFP2Q8WXD0 754 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 STK33Q9BYT3 514 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 SEMA4CQ9C0C4 833 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 CLPBQ9H078 707 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 MAGEH1Q9H213 219 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 RETREG1Q9H6L5 497 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 MBNL1Q9NR56 388 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms