RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 RASA4O43374 803 aa24.91■■□□□ 1.58
LIME1-206ENST00000487026 TSPAN6O43657 245 aa24.91■■□□□ 1.58
LIME1-206ENST00000487026 GIMD1P0DJR0 217 aa24.91■■□□□ 1.58
LIME1-206ENST00000487026 DAB2P98082 770 aa24.91■■□□□ 1.58
LIME1-206ENST00000487026 ILKQ13418 452 aa24.91■■□□□ 1.58
LIME1-206ENST00000487026 FZD2Q14332 565 aa24.91■■□□□ 1.58
LIME1-206ENST00000487026 GDPD4Q6W3E5 623 aa24.91■■□□□ 1.58
LIME1-206ENST00000487026 DNAAF5Q86Y56 855 aa24.91■■□□□ 1.58
LIME1-206ENST00000487026 NEBLO76041 1014 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 MBD3O95983 291 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 ITIH2P19823 946 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 TNFAIP3P21580 790 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 ANO6Q4KMQ2 910 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 HS1BP3Q53T59 392 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 TPRG1LQ5T0D9 272 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 KYAT3Q6YP21 454 aaKnown RBP24.9■■□□□ 1.58
LIME1-206ENST00000487026 TTC7BQ86TV6 843 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 DCP2Q8IU60 420 aaKnown RBP24.9■■□□□ 1.58
LIME1-206ENST00000487026 RAB7BQ96AH8 199 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 GDAP1L1Q96MZ0 367 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 EPAS1Q99814 870 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 TTYH3Q9C0H2 523 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 GPR27Q9NS67 375 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 GPATCH2LQ9NWQ4 482 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 TMEM63CQ9P1W3 806 aa24.9■■□□□ 1.58
LIME1-206ENST00000487026 IPO11Q9UI26 975 aaKnown RBP24.9■■□□□ 1.58
LIME1-206ENST00000487026 ZSCAN5CA6NGD5 496 aaPredicted RBP24.89■■□□□ 1.58
LIME1-206ENST00000487026 FPGTO14772 594 aa24.89■■□□□ 1.58
LIME1-206ENST00000487026 INSIG1O15503 277 aa24.89■■□□□ 1.58
LIME1-206ENST00000487026 CCDC172P0C7W6 258 aa24.89■■□□□ 1.58
LIME1-206ENST00000487026 RHOAP61586 193 aa24.89■■□□□ 1.58
LIME1-206ENST00000487026 INSM1Q01101 510 aaPredicted RBP24.89■■□□□ 1.58
LIME1-206ENST00000487026 FAM174AQ8TBP5 190 aa24.89■■□□□ 1.58
LIME1-206ENST00000487026 LENG8Q96PV6 779 aaPredicted RBP24.89■■□□□ 1.58
LIME1-206ENST00000487026 SYT11Q9BT88 431 aa24.89■■□□□ 1.58
LIME1-206ENST00000487026 OSBPL1AQ9BXW6 950 aa24.89■■□□□ 1.58
LIME1-206ENST00000487026 AK5Q9Y6K8 562 aa24.89■■□□□ 1.58
LIME1-206ENST00000487026 MYLKQ15746 1914 aa24.88■■□□□ 1.57
LIME1-206ENST00000487026 SPTY2D1-AS1A0A0U1RR47 76 aa24.88■■□□□ 1.57
LIME1-206ENST00000487026 ATMINO43313 823 aaPredicted RBP24.88■■□□□ 1.57
LIME1-206ENST00000487026 MMP20O60882 483 aa24.88■■□□□ 1.57
LIME1-206ENST00000487026 RABIFP47224 123 aa24.88■■□□□ 1.57
LIME1-206ENST00000487026 YBEYP58557 167 aaPredicted RBP24.88■■□□□ 1.57
LIME1-206ENST00000487026 SEMG2Q02383 582 aa24.88■■□□□ 1.57
LIME1-206ENST00000487026 SERINC3Q13530 473 aa24.88■■□□□ 1.57
LIME1-206ENST00000487026 PDE1CQ14123 709 aaPredicted RBP24.88■■□□□ 1.57
LIME1-206ENST00000487026 PDZD3Q86UT5 571 aa24.88■■□□□ 1.57
LIME1-206ENST00000487026 NXPE2Q96DL1 559 aa24.88■■□□□ 1.57
LIME1-206ENST00000487026 IFT43Q96FT9 208 aa24.88■■□□□ 1.57
LIME1-206ENST00000487026 EXOC2Q96KP1 924 aa24.88■■□□□ 1.57
LIME1-206ENST00000487026 APOLD1Q96LR9 279 aa24.88■■□□□ 1.57
LIME1-206ENST00000487026 DCBLD2Q96PD2 775 aa24.88■■□□□ 1.57
LIME1-206ENST00000487026 CATSPERBQ9H7T0 1116 aa24.88■■□□□ 1.57
LIME1-206ENST00000487026 RTN4Q9NQC3 1192 aaKnown RBP24.88■■□□□ 1.57
LIME1-206ENST00000487026 KLF15Q9UIH9 416 aa24.88■■□□□ 1.57
LIME1-206ENST00000487026 LRRC53A6NM62 1247 aa24.87■■□□□ 1.57
LIME1-206ENST00000487026 WASH4PA8MWX3 477 aa24.87■■□□□ 1.57
LIME1-206ENST00000487026 AREL1O15033 823 aa24.87■■□□□ 1.57
LIME1-206ENST00000487026 SCAMP1O15126 338 aa24.87■■□□□ 1.57
LIME1-206ENST00000487026 IGSF6O95976 241 aa24.87■■□□□ 1.57
LIME1-206ENST00000487026 CSF2P04141 144 aa24.87■■□□□ 1.57
LIME1-206ENST00000487026 TIMP2P16035 220 aa24.87■■□□□ 1.57
LIME1-206ENST00000487026 HNRNPKP61978 463 aaKnown RBP eCLIP24.87■■□□□ 1.57
LIME1-206ENST00000487026 RAD51Q06609 339 aa24.87■■□□□ 1.57
LIME1-206ENST00000487026 MAMLD1Q13495 774 aa24.87■■□□□ 1.57
LIME1-206ENST00000487026 CYTH1Q15438 398 aa24.87■■□□□ 1.57
LIME1-206ENST00000487026 INO80DQ53TQ3 878 aaPredicted RBP24.87■■□□□ 1.57
LIME1-206ENST00000487026 UMODL1-AS1Q8N2C9 162 aa24.87■■□□□ 1.57
LIME1-206ENST00000487026 NAT10Q9H0A0 1025 aaKnown RBP24.87■■□□□ 1.57
LIME1-206ENST00000487026 NLGN3Q9NZ94 848 aa24.87■■□□□ 1.57
LIME1-206ENST00000487026 CLCA2Q9UQC9 943 aa24.87■■□□□ 1.57
LIME1-206ENST00000487026 K7ESM1 405 aa24.86■■□□□ 1.57
LIME1-206ENST00000487026 ALPPL2P10696 532 aa24.86■■□□□ 1.57
LIME1-206ENST00000487026 AIF1P55008 147 aa24.86■■□□□ 1.57
LIME1-206ENST00000487026 TPI1P60174 286 aa24.86■■□□□ 1.57
LIME1-206ENST00000487026 CA9Q16790 459 aa24.86■■□□□ 1.57
LIME1-206ENST00000487026 PARP15Q460N3 678 aa24.86■■□□□ 1.57
LIME1-206ENST00000487026 VPS36Q86VN1 386 aa24.86■■□□□ 1.57
LIME1-206ENST00000487026 ZSCAN30Q86W11 494 aa24.86■■□□□ 1.57
LIME1-206ENST00000487026 ZNF548Q8NEK5 533 aaPredicted RBP24.86■■□□□ 1.57
LIME1-206ENST00000487026 CASKIN2Q8WXE0 1202 aa24.86■■□□□ 1.57
LIME1-206ENST00000487026 RFFLQ8WZ73 363 aa24.86■■□□□ 1.57
LIME1-206ENST00000487026 CENPTQ96BT3 561 aa24.86■■□□□ 1.57
LIME1-206ENST00000487026 CELF6Q96J87 481 aaKnown RBP24.86■■□□□ 1.57
LIME1-206ENST00000487026 WRAP53Q9BUR4 548 aaKnown RBP24.86■■□□□ 1.57
LIME1-206ENST00000487026 LHX3Q9UBR4 397 aa24.86■■□□□ 1.57
LIME1-206ENST00000487026 PCSK1NQ9UHG2 260 aa24.86■■□□□ 1.57
LIME1-206ENST00000487026 NEMP2A6NFY4 417 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 J3KR12 359 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 MT-CO3P00414 261 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 CKMT1AP12532 417 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 NME1P15531 152 aaKnown RBP24.85■■□□□ 1.57
LIME1-206ENST00000487026 PSMA2P25787 234 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 E2F1Q01094 437 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 PARGQ86W56 976 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 ARFGAP1Q8N6T3 406 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 ASB12Q8WXK4 309 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 ARHGEF26Q96DR7 871 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 CRELD1Q96HD1 420 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 VCPIP1Q96JH7 1222 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms