RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 CASP8AP2Q9UKL3 1982 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 MAP3K7O43318 606 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 PIGNO95427 931 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 EOMESO95936 686 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 GNRH1P01148 92 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 HSPA8P11142 646 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 ITGAXP20702 1163 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 PSEN1P49768 467 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 NDST2P52849 883 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 WNT3AP56704 352 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 HNRNPDQ14103 355 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 SEPT6Q14141 434 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 NFE2Q16621 373 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 ARL13AQ5H913 290 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 SEL1L3Q68CR1 1132 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 ZNF470Q6ECI4 717 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 AAGABQ6PD74 315 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 FRMD7Q6ZUT3 714 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 RTN4RL1Q86UN2 441 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 ARHGAP18Q8N392 663 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 NXNL1Q96CM4 212 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 SHCBP1LQ9BZQ2 653 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 ATXN3LQ9H3M9 355 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 PRDM5Q9NQX1 630 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 XPR1Q9UBH6 696 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 FRMPD3Q5JV73 1810 aa18.18■□□□□ 0.5
PDLIM7-207ENST00000486828 A0A087X1B8 175 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 DLX3O60479 287 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 SMNDC1O75940 238 aaKnown RBP eCLIP18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 RHOQP17081 205 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 GPR15P49685 360 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 LBX1P52954 281 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 NAGLUP54802 743 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 TBX4P57082 545 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 DLG1Q12959 904 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 CUL3Q13618 768 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 ZNF460Q14592 562 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 PCSK7Q16549 785 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 DDR2Q16832 855 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 CLLU1OSQ5K130 101 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 TMC7Q7Z402 723 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 KDELC2Q7Z4H8 507 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 COLGALT2Q8IYK4 626 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 MOCOSQ96EN8 888 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 ELMO2Q96JJ3 720 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 FBXO5Q9UKT4 447 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 ARHGAP26Q9UNA1 814 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 LRCH1Q9Y2L9 728 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 LOC100653049A0A140TA62 436 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 HEATR9A2RTY3 570 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 SLCO1B7G3V0H7 640 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 GRID2O43424 1007 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 KRT34O76011 436 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 CCR10P46092 362 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 RENBPP51606 427 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 ASPHQ12797 758 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 ARHGEF6Q15052 776 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 MS4A13Q5J8X5 152 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 NOMO2Q5JPE7 1267 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 NEPROQ6NW34 567 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 KIAA0408Q6ZU52 694 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 SLC24A5Q71RS6 500 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 SLC25A41Q8N5S1 370 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 SHKBP1Q8TBC3 707 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 FAM136AQ96C01 138 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 IMP4Q96G21 291 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 RANBP9Q96S59 729 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 RTKNQ9BST9 563 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 OSBPL1AQ9BXW6 950 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 ZYG11BQ9C0D3 744 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 ATP13A1Q9HD20 1204 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 TMEM248Q9NWD8 314 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 VTI1BQ9UEU0 232 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 CDH22Q9UJ99 828 aa18.17■□□□□ 0.5
PDLIM7-207ENST00000486828 GOLGA8QA0A0J9YX86 632 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 GOLGA8OA6NCC3 632 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 GOLGA8NF8WBI6 632 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 PRKAR2AP13861 404 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 TFEBP19484 476 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 OR1G1P47890 313 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 TAS2R39P59534 338 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 POU4F1Q01851 419 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 TFAP2DQ7Z6R9 452 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 LSMEM2Q8N112 164 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 PDCD6IPQ8WUM4 868 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 HMCESQ96FZ2 354 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 CNDP1Q96KN2 507 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 MRPL46Q9H2W6 279 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 WDR55Q9H6Y2 383 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 ACSS2Q9NR19 701 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 NDE1Q9NXR1 346 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 DONSONQ9NYP3 566 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 GMIPQ9P107 970 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 ZDHHC2Q9UIJ5 367 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 PCDHB5Q9Y5E4 795 aa18.16■□□□□ 0.5
PDLIM7-207ENST00000486828 CKBP12277 381 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 GRK4P32298 578 aa18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 KPNA2P52292 529 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-207ENST00000486828 EPHB1P54762 984 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms