RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 LRRC49Q8IUZ0 686 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 NAXDQ8IW45 347 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 TMEM145Q8NBT3 493 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 CHST14Q8NCH0 376 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 DEFB124Q8NES8 71 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 OR8K1Q8NGG5 319 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 FAM71BQ8TC56 605 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 TEKT4Q8WW24 435 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 SNX19Q92543 992 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 ARRDC3Q96B67 414 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 IFT43Q96FT9 208 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 SERAC1Q96JX3 654 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 ELF4Q99607 663 aaPredicted RBP7.12□□□□□ -1.27
VPS50-218ENST00000485994 C1QTNF2Q9BXJ5 285 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 KRTAP4-6Q9BYQ5 205 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 KLC2Q9H0B6 622 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 DYRK4Q9NR20 520 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 IFNKQ9P0W0 207 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 HECAQ9UBI9 543 aaPredicted RBP7.12□□□□□ -1.27
VPS50-218ENST00000485994 NENFQ9UMX5 172 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 AP4E1Q9UPM8 1137 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 PCDHB9Q9Y5E1 797 aa7.12□□□□□ -1.27
VPS50-218ENST00000485994 TP53BP1Q12888 1972 aaPredicted RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 PLXNB3Q9ULL4 1909 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 COL5A1P20908 1838 aaPredicted RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 ASXL3Q9C0F0 2248 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 A0A087X0T9 212 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 RCCD1A6NED2 376 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 ARHGAP42A6NI28 874 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 C16orf96A6NNT2 1141 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 TMCO5BA8MYB1 307 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 H0Y8X5 98 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 RNF103O00237 685 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 KPNA3O00505 521 aaPredicted RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 WNT9AO14904 365 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 BUB1O43683 1085 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 CREB3O43889 395 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 PRPSAP2O60256 369 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 PRAMEF11O60813 436 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 AVPP01185 164 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 FAM228BP0C875 321 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 ADRB3P13945 408 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 ERCC2P18074 760 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 CASP14P31944 242 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 MLLT3P42568 568 aaPredicted RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 GRK6P43250 576 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 CCT8P50990 548 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 NXPH1P58417 271 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 TPI1P60174 286 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 PPP2CBP62714 309 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 RPS21P63220 83 aaKnown RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 PPP2CAP67775 309 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 SIM1P81133 766 aaPredicted RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 RFTN1Q14699 578 aaPredicted RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 AGERQ15109 404 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 CYTH1Q15438 398 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 NFKBIBQ15653 356 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 DPYSL2Q16555 572 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 ZNF284Q2VY69 593 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 KCNT1Q5JUK3 1230 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 SPECC1LQ69YQ0 1117 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 KIAA1161Q6NSJ0 714 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 FBXL19Q6PCT2 694 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 RFX8Q6ZV50 586 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 POLNQ7Z5Q5 900 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 RAB44Q7Z6P3 723 aaPredicted RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 ADAT2Q7Z6V5 191 aaKnown RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 OR2I1PQ8NGU4 316 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 SAP25Q8TEE9 199 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 ADAMTS14Q8WXS8 1223 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 ZNF653Q96CK0 615 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 ARHGEF26Q96DR7 871 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 ZNF641Q96N77 438 aaPredicted RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 ZNF599Q96NL3 588 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 DNAJC7Q99615 494 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.11□□□□□ -1.27
VPS50-218ENST00000485994 SNRNP25Q9BV90 132 aaKnown RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 SLC17A9Q9BYT1 436 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 XPO4Q9C0E2 1151 aaKnown RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 TNKS2Q9H2K2 1166 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 IL21RQ9HBE5 538 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 PDFQ9HBH1 243 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 GDF3Q9NR23 364 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 GPR27Q9NS67 375 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 CWC15Q9P013 229 aaKnown RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 RCOR3Q9P2K3 495 aaPredicted RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 IP6K2Q9UHH9 426 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 ZFR2Q9UPR6 939 aaKnown RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 APOBEC2Q9Y235 224 aaKnown RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 FNDC3AQ9Y2H6 1198 aaKnown RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 FCF1Q9Y324 198 aaKnown RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 MSRB2Q9Y3D2 182 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 NEUROG3Q9Y4Z2 214 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 FADS3Q9Y5Q0 445 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 PTPRBP23467 1997 aa7.11□□□□□ -1.27
VPS50-218ENST00000485994 URB1O60287 2271 aaKnown RBP7.11□□□□□ -1.27
VPS50-218ENST00000485994 A0A1W2PQU0 124 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 FAM170AA1A519 330 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 CFAP69A5D8W1 941 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 MYO1FO00160 1098 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms