RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	MCIDAS	D6RGH6	385 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	UBE2Q2L	H0YL09	131 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024		H7C1Q1	480 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	CLIC1	O00299	241 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	AP3D1	O14617	1153 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	SYN3	O14994	580 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	ALDOC	P09972	364 aa	Known RBP	4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	LAMP2	P13473	410 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	CDH2	P19022	906 aa	Predicted RBP	4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	PRPH2	P23942	346 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	HNF1B	P35680	557 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	GGT5	P36269	586 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	GJC1	P36383	396 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	ADPRH	P54922	357 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	SLC37A1	P57057	533 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	PSG6	Q00889	435 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	CUL4A	Q13619	759 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	BYSL	Q13895	437 aa	Known RBP	4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	KCNB1	Q14721	858 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	PFKFB3	Q16875	520 aa	Predicted RBP	4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	FAM133B	Q5BKY9	247 aa	Known RBP	4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	FAM205BP	Q63HN1	556 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	TMEM65	Q6PI78	240 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	DCDC5	Q6ZRR9	648 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	TMPRSS12	Q86WS5	348 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	SCN4B	Q8IWT1	228 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	GALNT16	Q8N428	558 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	GALNT4	Q8N4A0	578 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	C11orf65	Q8NCR3	313 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	METTL6	Q8TCB7	284 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	RUFY2	Q8WXA3	655 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	POMGNT1	Q8WZA1	660 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	EYA3	Q99504	573 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	ABHD14A	Q9BUJ0	271 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	HERC2P3	Q9BVR0	1158 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	CADM1	Q9BY67	442 aa	Known RBP	4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	CIPC	Q9C0C6	399 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	MUC13	Q9H3R2	512 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	IL21R	Q9HBE5	538 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	PDGFC	Q9NRA1	345 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	NKIRAS2	Q9NYR9	191 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	SH3BP4	Q9P0V3	963 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	SARDH	Q9UL12	918 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	DHDH	Q9UQ10	334 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	B3GNT3	Q9Y2A9	372 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	SETD5	Q9C0A6	1442 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	NRK	Q7Z2Y5	1582 aa		4.17	□□□□□ -1.74
VPS8-223	ENST00000485024	MEGF6	O75095	1541 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	NPIPB13	A6NJU9	1138 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	NPIPB5	A8MRT5	1133 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	NPIPB4	C9JG80	1138 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	SMIM22	K7EJ46	135 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	DSCR3	O14972	297 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	FYB1	O15117	783 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	GCAT	O75600	419 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	CNTN5	O94779	1100 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	MBP	P02686	304 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	SPARC	P09486	303 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	APEH	P13798	732 aa	Known RBP	4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	ARSA	P15289	507 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	PCSK6	P29122	969 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	MLH1	P40692	756 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	STAT6	P42226	847 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	SKIV2L2	P42285	1042 aa	Known RBP	4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	RAD52	P43351	418 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	VPS41	P49754	854 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	HOXA4	Q00056	320 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	CALD1	Q05682	793 aa	Known RBP	4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	NEXN	Q0ZGT2	675 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	LARS2	Q15031	903 aa	Known RBP	4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	TBCE	Q15813	527 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	RILPL1	Q5EBL4	403 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	MFSD4B	Q5TF39	518 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	KIAA1324	Q6UXG2	1013 aa	Known RBP	4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	TRIM72	Q6ZMU5	477 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	BRSK2	Q8IWQ3	736 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	OR8H2	Q8N162	312 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	FAM47B	Q8NA70	645 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	MAFA	Q8NHW3	353 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	NEK9	Q8TD19	979 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	RAB40A	Q8WXH6	277 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	SMARCE1	Q969G3	411 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	FAM149B1	Q96BN6	582 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	NSUN4	Q96CB9	384 aa	Known RBP	4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	CCDC34	Q96HJ3	373 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	NR1H4	Q96RI1	486 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	MMS19	Q96T76	1030 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	CTDSP1	Q9GZU7	261 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	SLC25A18	Q9H1K4	315 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	EPHX3	Q9H6B9	360 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	ARL8B	Q9NVJ2	186 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	HCFC1R1	Q9NWW0	138 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	IL1RAPL1	Q9NZN1	696 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	EHD2	Q9NZN4	543 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	FBXO40	Q9UH90	709 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	NAALADL1	Q9UQQ1	740 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	TMEM5	Q9Y2B1	443 aa		4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS8-223	ENST00000485024	RPS6KL1	Q9Y6S9	549 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms