RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 DENND5AQ6IQ26 1287 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 UGT2A3Q6UWM9 527 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 ISLR2Q6UXK2 745 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 PQLC1Q8N2U9 271 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 KYQ8NBH2 561 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 SLC43A3Q8NBI5 491 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 USP13Q92995 863 aaPredicted RBP15.06■□□□□ 0
ATG4B-220ENST00000482507 NXNL1Q96CM4 212 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 OMDQ99983 421 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 DNAI2Q9GZS0 605 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 XPR1Q9UBH6 696 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 TRPV2Q9Y5S1 764 aa15.06■□□□□ 0
ATG4B-220ENST00000482507 MTSS1O43312 755 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 PEX1O43933 1283 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 CD52P31358 61 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 PPARGP37231 505 aaPredicted RBP15.05■□□□□ 0
ATG4B-220ENST00000482507 MRPS22P82650 360 aaKnown RBP15.05■□□□□ 0
ATG4B-220ENST00000482507 POU6F1Q14863 301 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 PDCD2Q16342 344 aaPredicted RBP15.05■□□□□ 0
ATG4B-220ENST00000482507 FAM219BQ5XKK7 198 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 PM20D1Q6GTS8 502 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 TWF2Q6IBS0 349 aaKnown RBP15.05■□□□□ 0
ATG4B-220ENST00000482507 ZNF280DQ6N043 979 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 LRRC8EQ6NSJ5 796 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 ESRP1Q6NXG1 681 aaKnown RBP15.05■□□□□ 0
ATG4B-220ENST00000482507 TAC4Q86UU9 113 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 LILRA2Q8N149 483 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 RDH11Q8TC12 318 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 SREK1Q8WXA9 508 aaKnown RBP15.05■□□□□ 0
ATG4B-220ENST00000482507 BRD8Q9H0E9 1235 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 TSPYL2Q9H2G4 693 aaPredicted RBP15.05■□□□□ 0
ATG4B-220ENST00000482507 VCX3BQ9H321 246 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 SUDS3Q9H7L9 328 aaPredicted RBP15.05■□□□□ 0
ATG4B-220ENST00000482507 PSMD13Q9UNM6 376 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 ANKRD6Q9Y2G4 727 aa15.05■□□□□ 0
ATG4B-220ENST00000482507 TXNDC9O14530 226 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 CACNG3O60359 315 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 CAPN15O75808 1086 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 VAPBO95292 243 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 CKBP12277 381 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 ARCN1P48444 511 aaKnown RBP15.05■□□□□ -0
ATG4B-220ENST00000482507 CLCNKBP51801 687 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 ATXN3P54252 364 aaPredicted RBP15.05■□□□□ -0
ATG4B-220ENST00000482507 MGAT3Q09327 533 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 CYLC2Q14093 348 aaPredicted RBP15.05■□□□□ -0
ATG4B-220ENST00000482507 TRIM71Q2Q1W2 868 aaKnown RBP15.05■□□□□ -0
ATG4B-220ENST00000482507 KLHDC8BQ8IXV7 354 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 KDM1BQ8NB78 822 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 RP9Q8TA86 221 aaKnown RBP15.05■□□□□ -0
ATG4B-220ENST00000482507 VAT1Q99536 393 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 EPAS1Q99814 870 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 CCDC28BQ9BUN5 200 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 TRIM4Q9C037 500 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 MIOSQ9NXC5 875 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 UBAP1Q9NZ09 502 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 PRPF19Q9UMS4 504 aaKnown RBP15.05■□□□□ -0
ATG4B-220ENST00000482507 DTNAQ9Y4J8 743 aa15.05■□□□□ -0
ATG4B-220ENST00000482507 CFLARO15519 480 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 DDHD2O94830 711 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 APOA4P06727 396 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 SRGAP2BP0DMP2 458 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 ETS2P15036 469 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 RAB27AP51159 221 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 PRKAA1Q13131 559 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 SLC12A1Q13621 1099 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 ARL13BQ3SXY8 428 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 RASIP1Q5U651 963 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 NXNQ6DKJ4 435 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 NAPEPLDQ6IQ20 393 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 PKN3Q6P5Z2 889 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 BNC2Q6ZN30 1099 aaPredicted RBP15.04■□□□□ -0
ATG4B-220ENST00000482507 ARHGAP12Q8IWW6 846 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 ST13P4Q8IZP2 240 aaPredicted RBP15.04■□□□□ -0
ATG4B-220ENST00000482507 DCUN1D1Q96GG9 259 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 PAAF1Q9BRP4 392 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 COPG1Q9Y678 874 aaKnown RBP15.04■□□□□ -0
ATG4B-220ENST00000482507 DFFAO00273 331 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 AURKAO14965 403 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 ENO3P13929 434 aaPredicted RBP15.04■□□□□ -0
ATG4B-220ENST00000482507 EML3Q32P44 896 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 ARTNQ5T4W7 220 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 C16orf89Q6UX73 402 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 PNPLA1Q8N8W4 532 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 TXNDC5Q8NBS9 432 aaKnown RBP15.04■□□□□ -0
ATG4B-220ENST00000482507 ICA1LQ8NDH6 482 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 IPMKQ8NFU5 416 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 NCSTNQ92542 709 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 SGF29Q96ES7 293 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 TSPAN18Q96SJ8 248 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 ZBTB26Q9HCK0 441 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 RIMS3Q9UJD0 308 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 PADI3Q9ULW8 664 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 MYLKQ15746 1914 aa15.04■□□□□ -0
ATG4B-220ENST00000482507 C15orf38-AP3S2A0A0A6YYH1 394 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 TCAF2A6NFQ2 919 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 NEMP2A6NFY4 417 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 SNUPNO95149 360 aaKnown RBP15.03■□□□□ -0
ATG4B-220ENST00000482507 SMIM18P0DKX4 95 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 HADHAP40939 763 aa15.03■□□□□ -0
ATG4B-220ENST00000482507 FLOT2Q14254 428 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms