RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 H3BRJ5 948 aa20.17■□□□□ 0.82
MSH5-215ENST00000482280 DFFAO00273 331 aa20.17■□□□□ 0.82
MSH5-215ENST00000482280 ENC1O14682 589 aa20.17■□□□□ 0.82
MSH5-215ENST00000482280 CBFA2T2O43439 604 aa20.17■□□□□ 0.82
MSH5-215ENST00000482280 PAK4O96013 591 aaPredicted RBP20.17■□□□□ 0.82
MSH5-215ENST00000482280 TPM1P09493 284 aa20.17■□□□□ 0.82
MSH5-215ENST00000482280 CDK4P11802 303 aa20.17■□□□□ 0.82
MSH5-215ENST00000482280 PCK1P35558 622 aa20.17■□□□□ 0.82
MSH5-215ENST00000482280 TSR1Q2NL82 804 aaKnown RBP20.17■□□□□ 0.82
MSH5-215ENST00000482280 TMEM259Q4ZIN3 620 aa20.17■□□□□ 0.82
MSH5-215ENST00000482280 SPATS2Q86XZ4 545 aaKnown RBP20.17■□□□□ 0.82
MSH5-215ENST00000482280 CXorf40AQ8TE69 158 aa20.17■□□□□ 0.82
MSH5-215ENST00000482280 ZCCHC14Q8WYQ9 949 aaKnown RBP20.17■□□□□ 0.82
MSH5-215ENST00000482280 ZFR2Q9UPR6 939 aaKnown RBP20.17■□□□□ 0.82
MSH5-215ENST00000482280 HS3ST3A1Q9Y663 406 aa20.17■□□□□ 0.82
MSH5-215ENST00000482280 RNF103O00237 685 aa20.16■□□□□ 0.82
MSH5-215ENST00000482280 LRCH4O75427 683 aa20.16■□□□□ 0.82
MSH5-215ENST00000482280 PALMO75781 387 aa20.16■□□□□ 0.82
MSH5-215ENST00000482280 SSR1P43307 286 aaKnown RBP20.16■□□□□ 0.82
MSH5-215ENST00000482280 PAPOLAP51003 745 aaKnown RBP20.16■□□□□ 0.82
MSH5-215ENST00000482280 CLDN2P57739 230 aa20.16■□□□□ 0.82
MSH5-215ENST00000482280 BOLA3Q53S33 107 aa20.16■□□□□ 0.82
MSH5-215ENST00000482280 Q6ZSR6 202 aa20.16■□□□□ 0.82
MSH5-215ENST00000482280 LZTR1Q8N653 840 aa20.16■□□□□ 0.82
MSH5-215ENST00000482280 GATA6Q92908 595 aa20.16■□□□□ 0.82
MSH5-215ENST00000482280 EXOC2Q96KP1 924 aa20.16■□□□□ 0.82
MSH5-215ENST00000482280 KCTD15Q96SI1 283 aaPredicted RBP20.16■□□□□ 0.82
MSH5-215ENST00000482280 CINPQ9BW66 212 aaPredicted RBP20.16■□□□□ 0.82
MSH5-215ENST00000482280 LRRC19Q9H756 370 aa20.16■□□□□ 0.82
MSH5-215ENST00000482280 KLHL11Q9NVR0 708 aa20.16■□□□□ 0.82
MSH5-215ENST00000482280 IP6K2Q9UHH9 426 aa20.16■□□□□ 0.82
MSH5-215ENST00000482280 MFHAS1Q9Y4C4 1052 aa20.16■□□□□ 0.82
MSH5-215ENST00000482280 PCNX2A6NKB5 2137 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 FAM221BA6H8Z2 402 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 IGLON5A6NGN9 336 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 H3BM21 787 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 PRAMEF11O60813 436 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 SDC3O75056 442 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 ALPPL2P10696 532 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 ERCC2P18074 760 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 PBX1P40424 430 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 RABIFP47224 123 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 HCAR3P49019 387 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 SUOXP51687 545 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 ELP6Q0PNE2 266 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 BNIP3Q12983 259 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 SHBQ15464 509 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 CA9Q16790 459 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 OR13H1Q8NG92 308 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 HSPH1Q92598 858 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 PEBP4Q96S96 227 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 CPEB1Q9BZB8 566 aaKnown RBP20.15■□□□□ 0.82
MSH5-215ENST00000482280 TRIM7Q9C029 511 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 SLC39A8Q9C0K1 460 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 KLC2Q9H0B6 622 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 DEF6Q9H4E7 631 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 EVA1BQ9NVM1 165 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 ZNHIT6Q9NWK9 470 aaKnown RBP20.15■□□□□ 0.82
MSH5-215ENST00000482280 ANAPC7Q9UJX3 599 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 TMEM131Q92545 1883 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 ACACBO00763 2458 aa20.15■□□□□ 0.82
MSH5-215ENST00000482280 NEMP2A6NFY4 417 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 RFPL3O75679 317 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 C1SP09871 688 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 HNF1BP35680 557 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 ABL2P42684 1182 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 TRIM14Q14142 442 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 CCDC122Q5T0U0 273 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 HGSNATQ68CP4 663 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 ERAP2Q6P179 960 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 ALKBH5Q6P6C2 394 aaKnown RBP20.14■□□□□ 0.81
MSH5-215ENST00000482280 TMCO3Q6UWJ1 677 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 KYAT3Q6YP21 454 aaKnown RBP20.14■□□□□ 0.81
MSH5-215ENST00000482280 GCNT7Q6ZNI0 430 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 ABI3BPQ7Z7G0 1075 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 KDF1Q8NAX2 398 aaPredicted RBP20.14■□□□□ 0.81
MSH5-215ENST00000482280 NETO2Q8NC67 525 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 DENND6BQ8NEG7 585 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 NSMCE1Q8WV22 266 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 IFT43Q96FT9 208 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 NUP85Q9BW27 656 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 THAP2Q9H0W7 228 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 ATP13A3Q9H7F0 1226 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.14■□□□□ 0.81
MSH5-215ENST00000482280 DNAJC28Q9NX36 388 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 DKK3Q9UBP4 350 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 ZMIZ1Q9ULJ6 1067 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 ITM2BQ9Y287 266 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 PCDHGA1Q9Y5H4 931 aa20.14■□□□□ 0.81
MSH5-215ENST00000482280 J3KR12 359 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 MYO1FO00160 1098 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 TM7SF2O76062 418 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 SERPINA4P29622 427 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 CASP14P31944 242 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 RENBPP51606 427 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 THOP1P52888 689 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 HNRNPKP61978 463 aaKnown RBP eCLIP20.13■□□□□ 0.813e-7■■■□□ 17.1
MSH5-215ENST00000482280 DAB2P98082 770 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 PTK2BQ14289 1009 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 KRT81Q14533 505 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms