RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 LRRC69Q6ZNQ3 347 aa19.12■□□□□ 0.65
ABCF3-214ENST00000480562 PARGQ86W56 976 aa19.12■□□□□ 0.65
ABCF3-214ENST00000480562 PHF13Q86YI8 300 aaPredicted RBP19.12■□□□□ 0.65
ABCF3-214ENST00000480562 ZNF548Q8NEK5 533 aaPredicted RBP19.12■□□□□ 0.65
ABCF3-214ENST00000480562 NTAN1Q96AB6 310 aa19.12■□□□□ 0.65
ABCF3-214ENST00000480562 RAB7BQ96AH8 199 aa19.12■□□□□ 0.65
ABCF3-214ENST00000480562 KLC2Q9H0B6 622 aa19.12■□□□□ 0.65
ABCF3-214ENST00000480562 RETREG1Q9H6L5 497 aa19.12■□□□□ 0.65
ABCF3-214ENST00000480562 NOL6Q9H6R4 1146 aaKnown RBP19.12■□□□□ 0.65
ABCF3-214ENST00000480562 SEPT11Q9NVA2 429 aaKnown RBP19.12■□□□□ 0.65
ABCF3-214ENST00000480562 BPTFQ12830 3046 aa19.11■□□□□ 0.65
ABCF3-214ENST00000480562 TMCC1O94876 653 aa19.11■□□□□ 0.65
ABCF3-214ENST00000480562 CSF2P04141 144 aa19.11■□□□□ 0.65
ABCF3-214ENST00000480562 CDCP2Q5VXM1 449 aa19.11■□□□□ 0.65
ABCF3-214ENST00000480562 SCYL2Q6P3W7 929 aa19.11■□□□□ 0.65
ABCF3-214ENST00000480562 SLFN11Q7Z7L1 901 aa19.11■□□□□ 0.65
ABCF3-214ENST00000480562 C3orf20Q8ND61 904 aa19.11■□□□□ 0.65
ABCF3-214ENST00000480562 NEK11Q8NG66 645 aa19.11■□□□□ 0.65
ABCF3-214ENST00000480562 FGF11Q92914 225 aa19.11■□□□□ 0.65
ABCF3-214ENST00000480562 LENG8Q96PV6 779 aaPredicted RBP19.11■□□□□ 0.65
ABCF3-214ENST00000480562 RAI2Q9Y5P3 530 aa19.11■□□□□ 0.65
ABCF3-214ENST00000480562 SIGLEC16A6NMB1 481 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 H3BM21 787 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 RRP8O43159 456 aaKnown RBP19.1■□□□□ 0.65
ABCF3-214ENST00000480562 CCP110O43303 1012 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 CALB1P05937 261 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 JUNDP17535 347 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 ITIH2P19823 946 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 EPHB2P29323 1055 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 GSCP56915 257 aaPredicted RBP19.1■□□□□ 0.65
ABCF3-214ENST00000480562 EIF2B5Q13144 721 aaKnown RBP19.1■□□□□ 0.65
ABCF3-214ENST00000480562 GDPD4Q6W3E5 623 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 RBM43Q6ZSC3 357 aaKnown RBP19.1■□□□□ 0.65
ABCF3-214ENST00000480562 TTC7BQ86TV6 843 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 VPS36Q86VN1 386 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 ZSCAN30Q86W11 494 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 RTL3Q8N8U3 475 aaKnown RBP19.1■□□□□ 0.65
ABCF3-214ENST00000480562 FAM181AQ8N9Y4 354 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 SNIP1Q8TAD8 396 aaKnown RBP19.1■□□□□ 0.65
ABCF3-214ENST00000480562 HMCESQ96FZ2 354 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 DUSP23Q9BVJ7 150 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 OSBPL1AQ9BXW6 950 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 DAAM1Q9Y4D1 1078 aa19.1■□□□□ 0.65
ABCF3-214ENST00000480562 TCRBV5S1A1TA0A578 114 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 LGALS16A8MUM7 142 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 AREL1O15033 823 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 CREB3O43889 395 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 MMP20O60882 483 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 ACTN2P35609 894 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 PFN3P60673 137 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 RPL7AP62424 266 aaKnown RBP19.09■□□□□ 0.65
ABCF3-214ENST00000480562 UBXN1Q04323 297 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 EFHC2Q5JST6 749 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 DNAJC24Q6P3W2 148 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 CLEC17AQ6ZS10 378 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 MON1BQ7L1V2 547 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 RBFAQ8N0V3 343 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 DENND6BQ8NEG7 585 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 IFI44Q8TCB0 444 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 LMX1AQ8TE12 382 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 ASB12Q8WXK4 309 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 BAP1Q92560 729 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 CENPTQ96BT3 561 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 GDAP1L1Q96MZ0 367 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 MCEEQ96PE7 176 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 AGPAT1Q99943 283 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 TTYH3Q9C0H2 523 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 TCEAL2Q9H3H9 227 aaPredicted RBP19.09■□□□□ 0.65
ABCF3-214ENST00000480562 PRORYQ9H606 182 aa19.09■□□□□ 0.65
ABCF3-214ENST00000480562 LIMA1Q9UHB6 759 aaKnown RBP19.09■□□□□ 0.65
ABCF3-214ENST00000480562 CPED1A4D0V7 1026 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 ZSCAN5CA6NGD5 496 aaPredicted RBP19.08■□□□□ 0.64
ABCF3-214ENST00000480562 RASA4BC9J798 803 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 INSIG1O15503 277 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 AQP9O43315 295 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 RASA4O43374 803 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 CSO75390 466 aaKnown RBP19.08■□□□□ 0.64
ABCF3-214ENST00000480562 IGFALSP35858 605 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 DUSP3P51452 185 aaPredicted RBP19.08■□□□□ 0.64
ABCF3-214ENST00000480562 ZNF143P52747 638 aaPredicted RBP19.08■□□□□ 0.64
ABCF3-214ENST00000480562 CCDC173Q0VFZ6 552 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 CDKN3Q16667 212 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 DEFB133Q30KQ1 61 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 TBC1D25Q3MII6 688 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 ZCCHC8Q6NZY4 707 aaKnown RBP19.08■□□□□ 0.64
ABCF3-214ENST00000480562 MAPK15Q8TD08 544 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 ARHGEF26Q96DR7 871 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 DEPDC7Q96QD5 511 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 WRAP53Q9BUR4 548 aaKnown RBP19.08■□□□□ 0.64
ABCF3-214ENST00000480562 ABCG4Q9H172 646 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 USP29Q9HBJ7 922 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 EVA1BQ9NVM1 165 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 FZD10Q9ULW2 581 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 CSNK1G3Q9Y6M4 447 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 PTPRQQ9UMZ3 2332 aa19.08■□□□□ 0.64
ABCF3-214ENST00000480562 EIF4E1BA6NMX2 242 aaKnown RBP19.07■□□□□ 0.64
ABCF3-214ENST00000480562 USP12O75317 370 aa19.07■□□□□ 0.64
ABCF3-214ENST00000480562 IGSF6O95976 241 aa19.07■□□□□ 0.64
ABCF3-214ENST00000480562 MPOP05164 745 aa19.07■□□□□ 0.64
ABCF3-214ENST00000480562 GP1BAP07359 652 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms