RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 LEPRP48357 1165 aaKnown RBP12.35□□□□□ -0.43
PTPRF-212ENST00000477970 CD151P48509 253 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 WNT3AP56704 352 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 ELAVL2Q12926 359 aaKnown RBP12.35□□□□□ -0.43
PTPRF-212ENST00000477970 GPR17Q13304 367 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 DLG2Q15700 870 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 ACSBG2Q5FVE4 666 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 ALG1LQ6GMV1 187 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 LRRC8EQ6NSJ5 796 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 ESRP1Q6NXG1 681 aaKnown RBP12.35□□□□□ -0.43
PTPRF-212ENST00000477970 ACVR1CQ8NER5 493 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 DIS3LQ8TF46 1054 aaKnown RBP12.35□□□□□ -0.43
PTPRF-212ENST00000477970 CMTM5Q96DZ9 223 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 ZNF599Q96NL3 588 aa12.35□□□□□ -0.43
PTPRF-212ENST00000477970 CDK5RAP1Q96SZ6 601 aaKnown RBP12.35□□□□□ -0.43
PTPRF-212ENST00000477970 GATA5Q9BWX5 397 aaPredicted RBP12.35□□□□□ -0.43
PTPRF-212ENST00000477970 FAM95CA0A1B0GW59 222 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 MROH6A6NGR9 719 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 MATN2O00339 956 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 MMP2P08253 660 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 STMN1P16949 149 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 SLC26A3P40879 764 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 SLC1A2P43004 574 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 USP46P62068 366 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 PRKAA1Q13131 559 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 UBAP2LQ14157 1087 aaKnown RBP12.34□□□□□ -0.43
PTPRF-212ENST00000477970 POU6F1Q14863 301 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 CTXN3Q4LDR2 81 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 GIMAP7Q8NHV1 300 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 TTLL2Q9BWV7 592 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 ILKAPQ9H0C8 392 aaPredicted RBP12.34□□□□□ -0.43
PTPRF-212ENST00000477970 MPP6Q9NZW5 540 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 MAGED2Q9UNF1 606 aaPredicted RBP12.34□□□□□ -0.43
PTPRF-212ENST00000477970 TANC1Q9C0D5 1861 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 A0A1W2PQ45 241 aaPredicted RBP12.34□□□□□ -0.43
PTPRF-212ENST00000477970 A0A1W2PQY0 241 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 H7C4K7 107 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 SELPP16109 830 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 ELF1P32519 619 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 SERPINH1P50454 418 aaKnown RBP12.34□□□□□ -0.43
PTPRF-212ENST00000477970 CLCN5P51795 746 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 ACVR1Q04771 509 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 THOC5Q13769 683 aaKnown RBP12.34□□□□□ -0.43
PTPRF-212ENST00000477970 KPNB1Q14974 876 aaKnown RBP12.34□□□□□ -0.43
PTPRF-212ENST00000477970 NAA25Q14CX7 972 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 DDR2Q16832 855 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 TSTD2Q5T7W7 516 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 MARC1Q5VT66 337 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 CPSF7Q8N684 471 aaKnown RBP12.34□□□□□ -0.43
PTPRF-212ENST00000477970 HMCESQ96FZ2 354 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 ZNF570Q96NI8 536 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 CASD1Q96PB1 797 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 CCDC28BQ9BUN5 200 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 TASP1Q9H6P5 420 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 COG4Q9H9E3 785 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 LOC285095A0A1B0GVY8 99 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 SLC7A4O43246 635 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 LUC7L3O95232 432 aaKnown RBP12.34□□□□□ -0.43
PTPRF-212ENST00000477970 VAPBO95292 243 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 HAPLN1P10915 354 aaPredicted RBP12.34□□□□□ -0.43
PTPRF-212ENST00000477970 GPR15P49685 360 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 ACTR3P61158 418 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 SLC34A1Q06495 639 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 SH2D4BQ5SQS7 431 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 C6orf163Q5TEZ5 329 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 RAPH1Q70E73 1250 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 LRRC8DQ7L1W4 858 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 MFSD6LQ8IWD5 586 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 ULK2Q8IYT8 1036 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 CRIPAKQ8N1N5 446 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 ZNF781Q8N8C0 355 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 TDRD5Q8NAT2 981 aaKnown RBP12.34□□□□□ -0.43
PTPRF-212ENST00000477970 ATXN7L3BQ96GX2 97 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 MRPL57Q9BQC6 102 aaKnown RBP12.34□□□□□ -0.43
PTPRF-212ENST00000477970 TRPC7Q9HCX4 862 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 MARCH5Q9NX47 278 aa12.34□□□□□ -0.43
PTPRF-212ENST00000477970 MTMR11A4FU01 709 aa12.33□□□□□ -0.44
PTPRF-212ENST00000477970 ARVCFO00192 962 aa12.33□□□□□ -0.44
PTPRF-212ENST00000477970 HOXA2O43364 376 aa12.33□□□□□ -0.44
PTPRF-212ENST00000477970 CCNT2O60583 730 aaKnown RBP12.33□□□□□ -0.44
PTPRF-212ENST00000477970 CIB2O75838 187 aa12.33□□□□□ -0.44
PTPRF-212ENST00000477970 WISP3O95389 354 aaPredicted RBP12.33□□□□□ -0.44
PTPRF-212ENST00000477970 MOCS2O96007 188 aaPredicted RBP12.33□□□□□ -0.44
PTPRF-212ENST00000477970 PENKP01210 267 aaPredicted RBP12.33□□□□□ -0.44
PTPRF-212ENST00000477970 ACADSP16219 412 aa12.33□□□□□ -0.44
PTPRF-212ENST00000477970 PTDSS1P48651 473 aaKnown RBP12.33□□□□□ -0.44
PTPRF-212ENST00000477970 COPAP53621 1224 aa12.33□□□□□ -0.44
PTPRF-212ENST00000477970 PRPF38BQ5VTL8 546 aaKnown RBP12.33□□□□□ -0.44
PTPRF-212ENST00000477970 SNX30Q5VWJ9 437 aa12.33□□□□□ -0.44
PTPRF-212ENST00000477970 MYLK4Q86YV6 388 aaPredicted RBP12.33□□□□□ -0.44
PTPRF-212ENST00000477970 OVCA2Q8WZ82 227 aa12.33□□□□□ -0.44
PTPRF-212ENST00000477970 FBXO32Q969P5 355 aa12.33□□□□□ -0.44
PTPRF-212ENST00000477970 ZNF385DQ9H6B1 395 aa12.33□□□□□ -0.44
PTPRF-212ENST00000477970 MRGBPQ9NV56 204 aa12.33□□□□□ -0.44
PTPRF-212ENST00000477970 FBXO5Q9UKT4 447 aa12.33□□□□□ -0.44
PTPRF-212ENST00000477970 CORO1CQ9ULV4 474 aaPredicted RBP12.33□□□□□ -0.44
PTPRF-212ENST00000477970 NEBLO76041 1014 aa12.33□□□□□ -0.44
PTPRF-212ENST00000477970 EPOP01588 193 aa12.33□□□□□ -0.44
PTPRF-212ENST00000477970 HOXB8P17481 243 aaPredicted RBP12.33□□□□□ -0.44
PTPRF-212ENST00000477970 VHLP40337 213 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms