RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ZSCAN1Q8NBB4 408 aa12.81□□□□□ -0.36
SKA3-206ENST00000475251 OR6C4Q8NGE1 309 aa12.81□□□□□ -0.36
SKA3-206ENST00000475251 ISG20Q96AZ6 181 aaKnown RBP12.81□□□□□ -0.36
SKA3-206ENST00000475251 PGAP3Q96FM1 320 aaPredicted RBP12.81□□□□□ -0.36
SKA3-206ENST00000475251 TIGD1Q96MW7 591 aa12.81□□□□□ -0.36
SKA3-206ENST00000475251 TMEM74Q96NL1 305 aa12.81□□□□□ -0.36
SKA3-206ENST00000475251 GFM1Q96RP9 751 aaKnown RBP12.81□□□□□ -0.36
SKA3-206ENST00000475251 NPY6RQ99463 290 aa12.81□□□□□ -0.36
SKA3-206ENST00000475251 LRRC61Q9BV99 259 aa12.81□□□□□ -0.36
SKA3-206ENST00000475251 OSBPL1AQ9BXW6 950 aa12.81□□□□□ -0.36
SKA3-206ENST00000475251 ZDHHC6Q9H6R6 413 aa12.81□□□□□ -0.36
SKA3-206ENST00000475251 CAAP1Q9H8G2 361 aa12.81□□□□□ -0.36
SKA3-206ENST00000475251 EPB41L5Q9HCM4 733 aa12.81□□□□□ -0.36
SKA3-206ENST00000475251 HECAQ9UBI9 543 aaPredicted RBP12.81□□□□□ -0.36
SKA3-206ENST00000475251 ZDHHC9Q9Y397 364 aa12.81□□□□□ -0.36
SKA3-206ENST00000475251 RNF103O00237 685 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 GCATO75600 419 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 JMJD7P0C870 316 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 LIPCP11150 499 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 UGT1A5P35504 534 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 KRT9P35527 623 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 PPARDQ03181 441 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 DRAP1Q14919 205 aaPredicted RBP12.8□□□□□ -0.36
SKA3-206ENST00000475251 POLD3Q15054 466 aaPredicted RBP12.8□□□□□ -0.36
SKA3-206ENST00000475251 ZNF805Q5CZA5 627 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 KLHL10Q6JEL2 608 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 TRIM65Q6PJ69 517 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 PASD1Q8IV76 773 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 RYBPQ8N488 228 aaPredicted RBP12.8□□□□□ -0.36
SKA3-206ENST00000475251 WDTC1Q8N5D0 677 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 EXD3Q8N9H8 876 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 OR7D4Q8NG98 312 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 NELFBQ8WX92 580 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 TMEM159Q96B96 161 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 SEMA3CQ99985 751 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 ZYG11BQ9C0D3 744 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 ACP6Q9NPH0 428 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 STARD5Q9NSY2 213 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 MPP6Q9NZW5 540 aa12.8□□□□□ -0.36
SKA3-206ENST00000475251 PMS2P1A4D2B8 440 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 C16orf96A6NNT2 1141 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 TMEM110-MUSTN1A8MSY1 372 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 D6RAR5 112 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 TERTO14746 1132 aaKnown RBP12.79□□□□□ -0.36
SKA3-206ENST00000475251 NVLO15381 856 aaKnown RBP12.79□□□□□ -0.36
SKA3-206ENST00000475251 YY2O15391 372 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 EFSO43281 561 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 ZMPSTE24O75844 475 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 TM7SF2O76062 418 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 ERBB2P04626 1255 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 CTSEP14091 401 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 TSHRP16473 764 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 CCKBRP32239 447 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 SCNN1AP37088 669 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 SNRPD1P62314 119 aaKnown RBP12.79□□□□□ -0.36
SKA3-206ENST00000475251 GNA12Q03113 381 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 C1orf61Q13536 156 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 ARHGAP44Q17R89 818 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 LINC00303Q3SY05 128 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 MANEAQ5SRI9 462 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 TPRG1LQ5T0D9 272 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 ZNF574Q6ZN55 896 aaPredicted RBP12.79□□□□□ -0.36
SKA3-206ENST00000475251 ATL2Q8NHH9 583 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 NT5C3BQ969T7 300 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 CENPTQ96BT3 561 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 HAPLN3Q96S86 360 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 TRIM4Q9C037 500 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 RETREG1Q9H6L5 497 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 GDPD2Q9HCC8 539 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 GULP1Q9UBP9 304 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 APEX2Q9UBZ4 518 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 HPCAL4Q9UM19 191 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 FCF1Q9Y324 198 aaKnown RBP12.79□□□□□ -0.36
SKA3-206ENST00000475251 PCDHB11Q9Y5F2 797 aa12.79□□□□□ -0.36
SKA3-206ENST00000475251 BECN2A8MW95 431 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 SRGAP2O75044 1071 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 POP4O95707 220 aaKnown RBP12.78□□□□□ -0.36
SKA3-206ENST00000475251 GSRP00390 522 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 HTR1BP28222 390 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 EIF4A3P38919 411 aaKnown RBP12.78□□□□□ -0.36
SKA3-206ENST00000475251 ABL2P42684 1182 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 PEX5P50542 639 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 RNASE9P60153 205 aaKnown RBP12.78□□□□□ -0.36
SKA3-206ENST00000475251 ARF5P84085 180 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 RAD51Q06609 339 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 SLC25A52Q3SY17 297 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 PTPN20Q4JDL3 420 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 LCE2DQ5TA82 110 aaPredicted RBP12.78□□□□□ -0.36
SKA3-206ENST00000475251 OTUD1Q5VV17 481 aaPredicted RBP12.78□□□□□ -0.36
SKA3-206ENST00000475251 ISM2Q6H9L7 571 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 VPS36Q86VN1 386 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 GKN2Q86XP6 184 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 ELOA2Q8IYF1 753 aaPredicted RBP12.78□□□□□ -0.36
SKA3-206ENST00000475251 OR2AP1Q8NGE2 309 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 CXorf40AQ8TE69 158 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 SHC3Q92529 594 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 EXTL1Q92935 676 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 TM6SF2Q9BZW4 377 aa12.78□□□□□ -0.36
SKA3-206ENST00000475251 TCEAL2Q9H3H9 227 aaPredicted RBP12.78□□□□□ -0.36
SKA3-206ENST00000475251 PPARGC1AQ9UBK2 798 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms