RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 POLR3BQ9NW08 1133 aaPredicted RBP4.15□□□□□ -1.74
USP16-205ENST00000474835 DCTN4Q9UJW0 460 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 KIAA1257Q9ULG3 409 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 COPG1Q9Y678 874 aaKnown RBP4.15□□□□□ -1.74
USP16-205ENST00000474835 IKBKGQ9Y6K9 419 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 IGKV6D-21A0A0A0MT36 114 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 IQANK1A0A1B0GTG1 560 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 FAM92AA1XBS5 289 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 LEUTXA8MZ59 168 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 SPATA31C2B4DYI2 1134 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 B8ZZF3 427 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 EXTL3O43909 919 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 NPHS1O60500 1241 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 STAU1O95793 577 aaKnown RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 SNRPAP09012 282 aaKnown RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 PSMC3P17980 439 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 MASP1P48740 699 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 MXI1P50539 228 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 TKTL1P51854 596 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 KPNA1P52294 538 aaPredicted RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 MLLT6P55198 1093 aaPredicted RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 GJA9P57773 515 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 RPL7AP62424 266 aaKnown RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 FKBP1AP62942 108 aaKnown RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 SLC35A2P78381 396 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 SF3A3Q12874 501 aaKnown RBP eCLIP4.15□□□□□ -1.75
USP16-205ENST00000474835 SKIV2LQ15477 1246 aaKnown RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 AOC3Q16853 763 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 KIZQ2M2Z5 673 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 ZNF691Q5VV52 312 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 RNLSQ5VYX0 342 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 SHEQ5VZ18 495 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 EGFLAMQ63HQ2 1017 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 USP17L2Q6R6M4 530 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 TRILQ7L0X0 811 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 SNX20Q7Z614 316 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 RBM23Q86U06 439 aaKnown RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 GPIHBP1Q8IV16 184 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 DEFB107AQ8IZN7 70 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 RDH10Q8IZV5 341 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 ZFP90Q8TF47 636 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 DCAF4Q8WV16 495 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 RASSF5Q8WWW0 418 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 POMGNT1Q8WZA1 660 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 SEPT8Q92599 483 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 RHBDF1Q96CC6 855 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 RMND5BQ96G75 393 aaPredicted RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 ACAP3Q96P50 834 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 RAB34Q9BZG1 259 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 ASAH2Q9NR71 780 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 TBC1D23Q9NUY8 699 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 PNPOQ9NVS9 261 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 ASIC3Q9UHC3 531 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 TBK1Q9UHD2 729 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 SFMBT1Q9UHJ3 866 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 A0A0G2JND7 137 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 CLRN2A0PK11 232 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 KRT18P05783 430 aaKnown RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 GLULP15104 373 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 TCF3P15923 654 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 EFNA1P20827 205 aaPredicted RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 TNFAIP3P21580 790 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 CAPGP40121 348 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 SERPINB9P50453 376 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 ZNF143P52747 638 aaPredicted RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 CDH15P55291 814 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 KRT76Q01546 638 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 DHODHQ02127 395 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 BNIP3Q12983 259 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 MESDQ14696 234 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 PDK2Q15119 407 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 TRIP10Q15642 601 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 ZYXQ15942 572 aaKnown RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 ATP13A4Q4VNC1 1196 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 RARS2Q5T160 578 aaKnown RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 CCNYL2Q5T2Q4 361 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 GRAMD4Q6IC98 578 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 ZYG11AQ6WRX3 759 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 ARMCX6Q7L4S7 300 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 KCTD20Q7Z5Y7 419 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 ADAT2Q7Z6V5 191 aaKnown RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 LRRTM3Q86VH5 581 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 CENPLQ8N0S6 344 aaPredicted RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 ZNF781Q8N8C0 355 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 LEMD2Q8NC56 503 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 URGCPQ8TCY9 931 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 BLOC1S5Q8TDH9 187 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 TGFBRAP1Q8WUH2 860 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 STMN2Q93045 179 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 NXPE3Q969Y0 559 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 ROPN1LQ96C74 230 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 GIMAP5Q96F15 307 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 TOX2Q96NM4 488 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 OR2A14Q96R47 310 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 KIFC1Q9BW19 673 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 ATP13A1Q9HD20 1204 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 KCNK9Q9NPC2 374 aa4.15□□□□□ -1.75
USP16-205ENST00000474835 NGRNQ9NPE2 291 aaKnown RBP4.15□□□□□ -1.75
USP16-205ENST00000474835 FZD3Q9NPG1 666 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms