RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 MAPRE2Q15555 327 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 BTLAQ7Z6A9 289 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 TMEM135Q86UB9 458 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 FSTL5Q8N475 847 aaPredicted RBP18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 C1orf127Q8N9H9 656 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 KCTD4Q8WVF5 259 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 MFSD3Q96ES6 412 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 TUBA1CQ9BQE3 449 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 ZNF302Q9NR11 478 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 CROTQ9UKG9 612 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 TLK1Q9UKI8 766 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 OAZ3Q9UMX2 235 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 FIS1Q9Y3D6 152 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 MAFBQ9Y5Q3 323 aaPredicted RBP18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 SNX9Q9Y5X1 595 aa18.81■□□□□ 0.6
ECHDC1-214ENST00000474289 PSME4Q14997 1843 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 KCNH1O95259 989 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 CPNE6O95741 557 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 HSPA8P11142 646 aaKnown RBP18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 PABPC1P11940 636 aaKnown RBP18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 IDUAP35475 653 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 CSRP3P50461 194 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 TMBIM6P55061 237 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 EML3Q32P44 896 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 HSDL1Q3SXM5 330 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 SMYD5Q6GMV2 418 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 NANOGNBQ7Z5D8 188 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 ARL10Q8N8L6 244 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 SPPL2BQ8TCT7 592 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 CNDP2Q96KP4 475 aaKnown RBP18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 MCMBPQ9BTE3 642 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 CD320Q9NPF0 282 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 GPRC5DQ9NZD1 345 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 BPTFQ12830 3046 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 LTBP4Q8N2S1 1624 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 HACD1B0YJ81 288 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 TARM1B6A8C7 271 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 MFSD11O43934 449 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 KDM1AO60341 852 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 SRP72O76094 671 aaKnown RBP18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 GOT1P17174 413 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 LRPAP1P30533 357 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 MPP1Q00013 466 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 SQLEQ14534 574 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 GRM3Q14832 879 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 THOC7Q6I9Y2 204 aaKnown RBP18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 TMEM214Q6NUQ4 689 aaKnown RBP18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 PMF1Q6P1K2 205 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 C8orf82Q6P1X6 216 aaPredicted RBP18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 SCUBE3Q8IX30 993 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 CADM3Q8N126 398 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 SHCBP1Q8NEM2 672 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 ATG4CQ96DT6 458 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 ALPK1Q96QP1 1244 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 MROQ9BYG7 248 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 SACM1LQ9NTJ5 587 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 FAM49BQ9NUQ9 324 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 XPR1Q9UBH6 696 aa18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 RUVBL2Q9Y230 463 aaKnown RBP18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 RBMX2Q9Y388 322 aaKnown RBP18.8■□□□□ 0.6
ECHDC1-214ENST00000474289 DHRS12A0PJE2 317 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 LSM1O15116 133 aaKnown RBP18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 SP2Q02086 613 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 ATP6AP1Q15904 470 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 ANO4Q32M45 955 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 LDLRAP1Q5SW96 308 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 STYK1Q6J9G0 422 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 FAM45BPQ6NSW5 357 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 CDR2LQ86X02 465 aaPredicted RBP18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 C12orf29Q8N999 325 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 FAM45AQ8TCE6 357 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 LPAR1Q92633 364 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 CCDC138Q96M89 665 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 TSNARE1Q96NA8 513 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 C9orf16Q9BUW7 83 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 SEPT3Q9UH03 358 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 PGAP2Q9UHJ9 254 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 VANGL2Q9ULK5 521 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 MAGED2Q9UNF1 606 aaPredicted RBP18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 ITGB3P05106 788 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 SNRPB2P08579 225 aaKnown RBP18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 CXCL8P10145 99 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 AVPR1AP37288 418 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 HLCSP50747 726 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 CCT8P50990 548 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 CSE1LP55060 971 aaKnown RBP18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 PPP1R3AQ16821 1122 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 LCLAT1Q6UWP7 414 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 KCNMB4Q86W47 210 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 TMEM192Q8IY95 271 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 CENPLQ8N0S6 344 aaPredicted RBP18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 ZNF567Q8N184 647 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 PYROXD2Q8N2H3 581 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 TMCO5AQ8N6Q1 288 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 OR9I1Q8NGQ6 314 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 UNKQ9C0B0 810 aaKnown RBP18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 SOX17Q9H6I2 414 aaPredicted RBP18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 RPAP3Q9H6T3 665 aaPredicted RBP18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 GTSE1Q9NYZ3 720 aa18.79■□□□□ 0.6
ECHDC1-214ENST00000474289 ANKRD6Q9Y2G4 727 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms