RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 DFNA5O60443 496 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 PRAMEF11O60813 436 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 DPYSQ14117 519 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 TRIM14Q14142 442 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 FGL2Q14314 439 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 PIGHQ14442 188 aaPredicted RBP18.19■□□□□ 0.5
UPF3A-203ENST00000474056 DPYSL2Q16555 572 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 AFMIDQ63HM1 303 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 SPECC1LQ69YQ0 1117 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 TXNRD3NBQ6F5E7 133 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 ARHGAP36Q6ZRI8 547 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 GLRX5Q86SX6 157 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 IQCHQ86VS3 1027 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 VSTM4Q8IW00 320 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 TP53INP2Q8IXH6 220 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 HSPH1Q92598 858 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 OSBPL1AQ9BXW6 950 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 ITM2BQ9Y287 266 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 MFHAS1Q9Y4C4 1052 aa18.19■□□□□ 0.5
UPF3A-203ENST00000474056 GOLGA4Q13439 2230 aaKnown RBP18.19■□□□□ 0.5
UPF3A-203ENST00000474056 DFFAO00273 331 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 SPINT1O43278 529 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 RARAP10276 462 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 HNRNPA2B1P22626 353 aaKnown RBP18.18■□□□□ 0.5
UPF3A-203ENST00000474056 EPHA8P29322 1005 aaPredicted RBP18.18■□□□□ 0.5
UPF3A-203ENST00000474056 AKT2P31751 481 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 GRK6P43250 576 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 HCAR3P49019 387 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 ZNF135P52742 658 aaPredicted RBP18.18■□□□□ 0.5
UPF3A-203ENST00000474056 CLDN2P57739 230 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 SLC25A11Q02978 314 aaKnown RBP18.18■□□□□ 0.5
UPF3A-203ENST00000474056 RAD51Q06609 339 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 OVGP1Q12889 678 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 MAPK8IP2Q13387 824 aaPredicted RBP18.18■□□□□ 0.5
UPF3A-203ENST00000474056 LRRC73Q5JTD7 316 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 KIAA1161Q6NSJ0 714 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 GDPD4Q6W3E5 623 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 GCNT7Q6ZNI0 430 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 SLCO6A1Q86UG4 719 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 NIPA2Q8N8Q9 360 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 PNPLA1Q8N8W4 532 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 ZNF564Q8TBZ8 553 aaPredicted RBP18.18■□□□□ 0.5
UPF3A-203ENST00000474056 KLHDC7BQ96G42 594 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 FEM1CQ96JP0 617 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 DNAJC7Q99615 494 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 PACSIN1Q9BY11 444 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.18■□□□□ 0.5
UPF3A-203ENST00000474056 ETNK2Q9NVF9 386 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 TOR4AQ9NXH8 423 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 IP6K2Q9UHH9 426 aa18.18■□□□□ 0.5
UPF3A-203ENST00000474056 MAGEC1O60732 1142 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 PIGNO95427 931 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 THEGLP0DJG4 465 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 ARL4AP40617 200 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 RPS21P63220 83 aaKnown RBP18.17■□□□□ 0.5
UPF3A-203ENST00000474056 BNIP3Q12983 259 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 BOLA3Q53S33 107 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 POLNQ7Z5Q5 900 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 CPNE8Q86YQ8 564 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 CHCHD4Q8N4Q1 142 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 OR8K1Q8NGG5 319 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 SAP25Q8TEE9 199 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 RAB7BQ96AH8 199 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 SLC17A9Q9BYT1 436 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 ERVMER34-1Q9H9K5 563 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 SP110Q9HB58 689 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 KLK13Q9UKR3 277 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 CEP295Q9C0D2 2601 aa18.17■□□□□ 0.5
UPF3A-203ENST00000474056 H3BRJ5 948 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 RAD51BO15315 384 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 YKT6O15498 198 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 TRIM16O95361 564 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 PAK4O96013 591 aaPredicted RBP18.16■□□□□ 0.5
UPF3A-203ENST00000474056 ITGAVP06756 1048 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 ATXN1LP0C7T5 689 aaKnown RBP18.16■□□□□ 0.5
UPF3A-203ENST00000474056 AMPD1P23109 780 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 RGRP47804 291 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 RXRGP48443 463 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 ARRB1P49407 418 aaPredicted RBP18.16■□□□□ 0.5
UPF3A-203ENST00000474056 SLC18A3Q16572 532 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 ASTE1Q2TB18 679 aaPredicted RBP18.16■□□□□ 0.5
UPF3A-203ENST00000474056 RAB44Q7Z6P3 723 aaPredicted RBP18.16■□□□□ 0.5
UPF3A-203ENST00000474056 OXR1Q8N573 874 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 OR13H1Q8NG92 308 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 TEKT4Q8WW24 435 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 CDC6Q99741 560 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 CPEB1Q9BZB8 566 aaKnown RBP18.16■□□□□ 0.5
UPF3A-203ENST00000474056 PCDH18Q9HCL0 1135 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 ABHD10Q9NUJ1 306 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 CACNA1BQ00975 2339 aa18.16■□□□□ 0.5
UPF3A-203ENST00000474056 IGLON5A6NGN9 336 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 GOLGA8CPA6NN73 597 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 MYO1FO00160 1098 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 NEMP1O14524 444 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 AREL1O15033 823 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 TSPAN6O43657 245 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 MFAP3LO75121 409 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 PALMO75781 387 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 ITIH2P19823 946 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 INAVAQ3KP66 663 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms