RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 RAP1GAP2Q684P5 730 aa11.32□□□□□ -0.6
MACF1-215ENST00000473843 CXorf57Q6NSI4 855 aaKnown RBP11.32□□□□□ -0.6
MACF1-215ENST00000473843 GKN2Q86XP6 184 aa11.32□□□□□ -0.6
MACF1-215ENST00000473843 CCAR2Q8N163 923 aaKnown RBP11.32□□□□□ -0.6
MACF1-215ENST00000473843 SLC4A11Q8NBS3 891 aa11.32□□□□□ -0.6
MACF1-215ENST00000473843 GPR156Q8NFN8 814 aa11.32□□□□□ -0.6
MACF1-215ENST00000473843 OR2A12Q8NGT7 310 aa11.32□□□□□ -0.6
MACF1-215ENST00000473843 PRR7Q8TB68 274 aa11.32□□□□□ -0.6
MACF1-215ENST00000473843 PDCD6IPQ8WUM4 868 aaKnown RBP11.32□□□□□ -0.6
MACF1-215ENST00000473843 STARD8Q92502 1023 aa11.32□□□□□ -0.6
MACF1-215ENST00000473843 WNT2BQ93097 391 aa11.32□□□□□ -0.6
MACF1-215ENST00000473843 ALG14Q96F25 216 aa11.32□□□□□ -0.6
MACF1-215ENST00000473843 SLC39A13Q96H72 371 aa11.32□□□□□ -0.6
MACF1-215ENST00000473843 ASPSCR1Q9BZE9 553 aa11.32□□□□□ -0.6
MACF1-215ENST00000473843 EDEM3Q9BZQ6 932 aa11.32□□□□□ -0.6
MACF1-215ENST00000473843 HS3ST2Q9Y278 367 aa11.32□□□□□ -0.6
MACF1-215ENST00000473843 FADS3Q9Y5Q0 445 aa11.32□□□□□ -0.6
MACF1-215ENST00000473843 IGLON5A6NGN9 336 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 ESPNB1AK53 854 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 F5H5T6 163 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 H3BQV1 296 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 RNF103O00237 685 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 TOR1BO14657 336 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 IKBKBO14920 756 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 CPNE6O95741 557 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 SRCP12931 536 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 TCN2P20062 427 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 IGFALSP35858 605 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 HK3P52790 923 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 RAD23BP54727 409 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 MRPL49Q13405 166 aaKnown RBP11.31□□□□□ -0.6
MACF1-215ENST00000473843 ATP1A1-AS1Q5TC04 95 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 PIM3Q86V86 326 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 CIR1Q86X95 450 aaPredicted RBP11.31□□□□□ -0.6
MACF1-215ENST00000473843 NLGN4XQ8N0W4 816 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 TTC39CQ8N584 583 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 NLGN4YQ8NFZ3 816 aaPredicted RBP11.31□□□□□ -0.6
MACF1-215ENST00000473843 GRIN3AQ8TCU5 1115 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 IRGQQ8WZA9 623 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 ART4Q93070 314 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 SLC29A3Q9BZD2 475 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 IL36AQ9UHA7 158 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 XPO7Q9UIA9 1087 aaKnown RBP11.31□□□□□ -0.6
MACF1-215ENST00000473843 PILRAQ9UKJ1 303 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 TSPAN16Q9UKR8 245 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 PHTF1Q9UMS5 762 aa11.31□□□□□ -0.6
MACF1-215ENST00000473843 CROCCQ5TZA2 2017 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 CSMD2Q7Z408 3487 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 LOC101059948A0A1B0GTJ6 334 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 TCP11X1B4DZS4 312 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 RFPL1O75677 317 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 APOEP02649 317 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 LTFP02788 710 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 CTSEP14091 401 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 MAP4P27816 1152 aaKnown RBP11.3□□□□□ -0.6
MACF1-215ENST00000473843 EIF4A3P38919 411 aaKnown RBP11.3□□□□□ -0.6
MACF1-215ENST00000473843 ARHGEF7Q14155 803 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 CLPPQ16740 277 aaPredicted RBP11.3□□□□□ -0.6
MACF1-215ENST00000473843 C16orf46Q6P387 395 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 TTC13Q8NBP0 860 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 CHST14Q8NCH0 376 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 RCBTB1Q8NDN9 531 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 GOLGA5Q8TBA6 731 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 DQX1Q8TE96 717 aaKnown RBP11.3□□□□□ -0.6
MACF1-215ENST00000473843 CENPTQ96BT3 561 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 C5orf34Q96MH7 638 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 FEM1AQ9BSK4 669 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 LRRC27Q9C0I9 530 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 TNMDQ9H2S6 317 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 RDH14Q9HBH5 336 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 HESX1Q9UBX0 185 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 FBXO2Q9UK22 296 aaPredicted RBP11.3□□□□□ -0.6
MACF1-215ENST00000473843 VPS28Q9UK41 221 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 ENTPD4Q9Y227 616 aa11.3□□□□□ -0.6
MACF1-215ENST00000473843 ANKRD36A6QL64 1941 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 IGHV5-10-1A0A0J9YXX1 117 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 A0A1B0GTL3 188 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 C3orf80F5H4A9 247 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 SMAPO00193 183 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 TSPAN6O43657 245 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 NUDT21O43809 227 aaKnown RBP11.29□□□□□ -0.6
MACF1-215ENST00000473843 LEFTY1O75610 366 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 SORBS2O94875 1100 aaKnown RBP11.29□□□□□ -0.6
MACF1-215ENST00000473843 RASGRP1O95267 797 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 HSP90AA1P07900 732 aaKnown RBP11.29□□□□□ -0.6
MACF1-215ENST00000473843 SETSIPP0DME0 302 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 LCP1P13796 627 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 L1CAMP32004 1257 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 RAB15P59190 212 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 CENPCQ03188 943 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 ABHD18Q0P651 414 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 TRA2AQ13595 282 aaKnown RBP eCLIP11.29□□□□□ -0.6
MACF1-215ENST00000473843 TCEA2Q15560 299 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 KNOP1Q1ED39 458 aaKnown RBP11.29□□□□□ -0.6
MACF1-215ENST00000473843 RABGAP1LQ5R372 815 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 HID1Q8IV36 788 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 ATP11CQ8NB49 1132 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 CCDC150Q8NCX0 1101 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 AGBL5Q8NDL9 886 aa11.29□□□□□ -0.6
MACF1-215ENST00000473843 BTN2A3PQ96KV6 586 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms