RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SLC35F5Q8WV83 523 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 SEPSECSQ9HD40 501 aaKnown RBP5.93□□□□□ -1.46
CCDC39-202ENST00000471307 KLQ9UEF7 1012 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 ZNF112Q9UJU3 913 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 PROCRQ9UNN8 238 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 ZNF142P52746 1687 aaPredicted RBP5.93□□□□□ -1.46
CCDC39-202ENST00000471307 PLEKHG1Q9ULL1 1385 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 LAMC1P11047 1609 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 F5H423 210 aaPredicted RBP5.92□□□□□ -1.46
CCDC39-202ENST00000471307 DSCR9P59020 149 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 CCDC38Q502W7 563 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 NADSYN1Q6IA69 706 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 NCAPH2Q6IBW4 605 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 FAM83HQ6ZRV2 1179 aaPredicted RBP5.92□□□□□ -1.46
CCDC39-202ENST00000471307 Q6ZSV7 163 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 ZNF367Q7RTV3 350 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 WDR5BQ86VZ2 330 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 POF1BQ8WVV4 589 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 SDCCAG3Q96C92 435 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 TM6SF1Q9BZW5 370 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 CLPBQ9H078 707 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 SEL1LQ9UBV2 794 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 FBXO40Q9UH90 709 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 KCND3Q9UK17 655 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 SRPRBQ9Y5M8 271 aaKnown RBP5.92□□□□□ -1.46
CCDC39-202ENST00000471307 SETBP1Q9Y6X0 1596 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 USP47Q96K76 1375 aa5.92□□□□□ -1.46
CCDC39-202ENST00000471307 NOTCH4Q99466 2003 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 CCDC194A0A1B0GVG4 234 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 SYN3O14994 580 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 LIASO43766 372 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 SOX30O94993 753 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 PRSS2P07478 247 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 ACP5P13686 325 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 THOC5Q13769 683 aaKnown RBP5.91□□□□□ -1.46
CCDC39-202ENST00000471307 KRT72Q14CN4 511 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 TDRD12Q587J7 1177 aaKnown RBP5.91□□□□□ -1.46
CCDC39-202ENST00000471307 RRAGAQ7L523 313 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 SERPINA11Q86U17 422 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 TMC8Q8IU68 726 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 BRSK2Q8IWQ3 736 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 SPICE1Q8N0Z3 855 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 SPATA3Q8NHX4 192 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 SLC39A13Q96H72 371 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 CDT1Q9H211 546 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 SAYSD1Q9NPB0 183 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 UPB1Q9UBR1 384 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 ALKQ9UM73 1620 aa5.91□□□□□ -1.46
CCDC39-202ENST00000471307 EIF3AQ14152 1382 aaKnown RBP5.91□□□□□ -1.46
CCDC39-202ENST00000471307 SCAF11Q99590 1463 aaKnown RBP5.9□□□□□ -1.46
CCDC39-202ENST00000471307 HMX3A6NHT5 357 aa5.9□□□□□ -1.46
CCDC39-202ENST00000471307 E7EVH7 732 aa5.9□□□□□ -1.46
CCDC39-202ENST00000471307 ASAP2O43150 1006 aa5.9□□□□□ -1.46
CCDC39-202ENST00000471307 METTL18O95568 372 aa5.9□□□□□ -1.46
CCDC39-202ENST00000471307 SKIV2L2P42285 1042 aaKnown RBP5.9□□□□□ -1.46
CCDC39-202ENST00000471307 PPP3CCP48454 512 aa5.9□□□□□ -1.46
CCDC39-202ENST00000471307 CDH12P55289 794 aa5.9□□□□□ -1.46
CCDC39-202ENST00000471307 NFATC4Q14934 902 aa5.9□□□□□ -1.46
CCDC39-202ENST00000471307 SYTL3Q4VX76 610 aa5.9□□□□□ -1.46
CCDC39-202ENST00000471307 RUNDC3AQ59EK9 446 aa5.9□□□□□ -1.46
CCDC39-202ENST00000471307 DLK2Q6UY11 383 aa5.9□□□□□ -1.46
CCDC39-202ENST00000471307 TEX45Q8NA69 505 aa5.9□□□□□ -1.46
CCDC39-202ENST00000471307 CEP76Q8TAP6 659 aa5.9□□□□□ -1.46
CCDC39-202ENST00000471307 KTI12Q96EK9 354 aaPredicted RBP5.9□□□□□ -1.46
CCDC39-202ENST00000471307 TAF1DQ9H5J8 278 aaPredicted RBP5.9□□□□□ -1.46
CCDC39-202ENST00000471307 C6orf106Q9H6K1 298 aaPredicted RBP5.9□□□□□ -1.46
CCDC39-202ENST00000471307 THAP1Q9NVV9 213 aa5.9□□□□□ -1.46
CCDC39-202ENST00000471307 CDH22Q9UJ99 828 aa5.9□□□□□ -1.46
CCDC39-202ENST00000471307 MED14O60244 1454 aa5.9□□□□□ -1.47
CCDC39-202ENST00000471307 ADGRB1O14514 1584 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 HSPB6O14558 160 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 LDB2O43679 373 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 LYL1P12980 280 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 TNNT1P13805 278 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 MVDP53602 400 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 PDCLQ13371 301 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 SYT13Q7L8C5 426 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 PALB2Q86YC2 1186 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 SCAIQ8N9R8 606 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 APOLD1Q96LR9 279 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 TWSG1Q9GZX9 223 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 PLEKHA2Q9HB19 425 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 GRHL1Q9NZI5 618 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 SRP68Q9UHB9 627 aaKnown RBP5.89□□□□□ -1.47
CCDC39-202ENST00000471307 ICKQ9UPZ9 632 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 DHDHQ9UQ10 334 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 DAAM1Q9Y4D1 1078 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 ABCC11Q96J66 1382 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 PIK3R4Q99570 1358 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 ADAMTS13Q76LX8 1427 aa5.89□□□□□ -1.47
CCDC39-202ENST00000471307 EYA2O00167 538 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 STRNO43815 780 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 PAPSS2O95340 614 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-202ENST00000471307 ARSAP15289 507 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 AVPR2P30518 371 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 GJC1P36383 396 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 RBM5P52756 815 aaKnown RBP eCLIP5.88□□□□□ -1.47
CCDC39-202ENST00000471307 ART1P52961 327 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 NUDT6P53370 316 aa5.88□□□□□ -1.47
CCDC39-202ENST00000471307 SEC61A1P61619 476 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms