RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 MYO1FO00160 1098 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 BUB1O43683 1085 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 LZTS3O60299 673 aaPredicted RBP9.25□□□□□ -0.93
SF3A1-206ENST00000471037 HSF2BPO75031 334 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 CLDN11O75508 207 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 DXOO77932 396 aaKnown RBP9.25□□□□□ -0.93
SF3A1-206ENST00000471037 MT-CO3P00414 261 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 GP1BAP07359 652 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 THEGLP0DJG4 465 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 GIMD1P0DJR0 217 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 CKMT1AP12532 417 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 SRCP12931 536 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 PLA2G2AP14555 144 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 DESP17661 470 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 DGKAP23743 735 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 NUMBP49757 651 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 IRAK1P51617 712 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 DAB2P98082 770 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 CCDC15Q0P6D6 951 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 AUHQ13825 339 aaKnown RBP9.25□□□□□ -0.93
SF3A1-206ENST00000471037 TAF5Q15542 800 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 C5orf22Q49AR2 442 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 ACCSLQ4AC99 568 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 CDCP2Q5VXM1 449 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 C11orf63Q6NUN7 778 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 PCSK4Q6UW60 755 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 KDM7AQ6ZMT4 941 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 NYAP1Q6ZVC0 841 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 PHLDB2Q86SQ0 1253 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 HORMAD1Q86X24 394 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 SYCE1Q8N0S2 351 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 DEFB106AQ8N104 65 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 LSMEM2Q8N112 164 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 ZNF843Q8N446 348 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 ZNF248Q8NDW4 579 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 TPCN2Q8NHX9 752 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 FAM174AQ8TBP5 190 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 IFT43Q96FT9 208 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 HIC2Q96JB3 615 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 ZNF578Q96N58 590 aaPredicted RBP9.25□□□□□ -0.93
SF3A1-206ENST00000471037 MCEEQ96PE7 176 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 METTL5Q9NRN9 209 aaKnown RBP9.25□□□□□ -0.93
SF3A1-206ENST00000471037 ANAPC7Q9UJX3 599 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 TMEM59LQ9UK28 342 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 VPS28Q9UK41 221 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 CA5BQ9Y2D0 317 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 PAXBP1Q9Y5B6 917 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 CAPN6Q9Y6Q1 641 aa9.25□□□□□ -0.93
SF3A1-206ENST00000471037 SHROOM3Q8TF72 1996 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 ASH1LQ9NR48 2969 aaKnown RBP9.24□□□□□ -0.93
SF3A1-206ENST00000471037 BPTFQ12830 3046 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 SETXQ7Z333 2677 aaKnown RBP9.24□□□□□ -0.93
SF3A1-206ENST00000471037 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.24□□□□□ -0.93
SF3A1-206ENST00000471037 A0A1W2PQU0 124 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 GRID2IPA4D2P6 1211 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 TMEM191CA6NGB0 347 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 CAPN8A6NHC0 703 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 C2CD4BA6NLJ0 364 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 ERVH48-1M5A8F1 160 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 OPA1O60313 960 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 DAB1O75553 588 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 PIAS2O75928 621 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 ZIC2O95409 532 aaPredicted RBP9.24□□□□□ -0.93
SF3A1-206ENST00000471037 CTSLP07711 333 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 GPD1P21695 349 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 HNRNPA2B1P22626 353 aaKnown RBP9.24□□□□□ -0.93
SF3A1-206ENST00000471037 MAN1A1P33908 653 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 RFC1P35251 1148 aaPredicted RBP9.24□□□□□ -0.93
SF3A1-206ENST00000471037 SLC1A1P43005 524 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 CLCN6P51797 869 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 UCNP55089 124 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 CDH4P55283 916 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 PCBP4P57723 403 aaKnown RBP9.24□□□□□ -0.93
SF3A1-206ENST00000471037 RPL7AP62424 266 aaKnown RBP9.24□□□□□ -0.93
SF3A1-206ENST00000471037 ETF1P62495 437 aaKnown RBP9.24□□□□□ -0.93
SF3A1-206ENST00000471037 CXADRP78310 365 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 ZNF177Q13360 481 aaPredicted RBP9.24□□□□□ -0.93
SF3A1-206ENST00000471037 PIGHQ14442 188 aaPredicted RBP9.24□□□□□ -0.93
SF3A1-206ENST00000471037 ZNF284Q2VY69 593 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 POM121L1PQ3SYA9 428 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 ZNF569Q5MCW4 686 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 ABI3BPQ7Z7G0 1075 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 NIPA2Q8N8Q9 360 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 FAM181AQ8N9Y4 354 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 TMIEQ8NEW7 156 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 OR13H1Q8NG92 308 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 OR2A12Q8NGT7 310 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 RNF34Q969K3 372 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 WBP1Q96G27 269 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 CCDC114Q96M63 670 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 DEPDC7Q96QD5 511 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 LGMNQ99538 433 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 NCAPGQ9BPX3 1015 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 C2orf49Q9BVC5 232 aaPredicted RBP9.24□□□□□ -0.93
SF3A1-206ENST00000471037 USP29Q9HBJ7 922 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 GPR27Q9NS67 375 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 UCKL1Q9NWZ5 548 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 NLGN3Q9NZ94 848 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 IP6K2Q9UHH9 426 aa9.24□□□□□ -0.93
SF3A1-206ENST00000471037 VANGL2Q9ULK5 521 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms