RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 PGM1P36871 562 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 GPD2P43304 727 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 CENPAP49450 140 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 BLKP51451 505 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 LTBQ06643 244 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.14□□□□□ -1.75
BRCA2-202ENST00000470094 FAM27E3Q08E93 113 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 TRAF2Q12933 501 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 CAPSQ13938 189 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 PLEKHO1Q53GL0 409 aaPredicted RBP4.14□□□□□ -1.75
BRCA2-202ENST00000470094 TDRD12Q587J7 1177 aaKnown RBP4.14□□□□□ -1.75
BRCA2-202ENST00000470094 RUSC1-AS1Q66K80 236 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 SPATA2LQ8IUW3 424 aaPredicted RBP4.14□□□□□ -1.75
BRCA2-202ENST00000470094 DENND6AQ8IWF6 608 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 MCPH1Q8NEM0 835 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 TMEM170AQ8WVE7 144 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 ADAMTS14Q8WXS8 1223 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 EYA3Q99504 573 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 MEIS3Q99687 375 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 MAF1Q9H063 256 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 SPATS2LQ9NUQ6 558 aaKnown RBP4.14□□□□□ -1.75
BRCA2-202ENST00000470094 ZNF580Q9UK33 172 aa4.14□□□□□ -1.75
BRCA2-202ENST00000470094 TYW5A2RUC4 315 aaKnown RBP4.13□□□□□ -1.75
BRCA2-202ENST00000470094 CHL1O00533 1208 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 SLC28A2O43868 658 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 SOX30O94993 753 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 GLUD1P00367 558 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 TGFB3P10600 412 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 CNTFP26441 200 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 CCKBRP32239 447 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 PSMC2P35998 433 aaKnown RBP4.13□□□□□ -1.75
BRCA2-202ENST00000470094 AMTP48728 403 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 GLUD2P49448 558 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 CCR5P51681 352 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 YWHAZP63104 245 aaKnown RBP4.13□□□□□ -1.75
BRCA2-202ENST00000470094 MYBPC2Q14324 1141 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 LPIN1Q14693 890 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 SHBQ15464 509 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 ZNF585BQ52M93 769 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 DCAF6Q58WW2 860 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 RETSATQ6NUM9 610 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 C8orf82Q6P1X6 216 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-202ENST00000470094 TMED8Q6PL24 325 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-202ENST00000470094 LRRC8DQ7L1W4 858 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 MON1AQ86VX9 555 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 LURAP1LQ8IV03 231 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 ADHFE1Q8IWW8 467 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 TNIP2Q8NFZ5 429 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 RUFY2Q8WXA3 655 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 MED30Q96HR3 178 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 YME1L1Q96TA2 773 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 PHF7Q9BWX1 381 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-202ENST00000470094 CDT1Q9H211 546 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 RRN3Q9NYV6 651 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 IL1RAPL1Q9NZN1 696 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 CNOT7Q9UIV1 285 aaKnown RBP4.13□□□□□ -1.75
BRCA2-202ENST00000470094 HSF4Q9ULV5 492 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 PCDHGB5Q9Y5G0 923 aa4.13□□□□□ -1.75
BRCA2-202ENST00000470094 IGHV4-28A0A0C4DH34 117 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 PABPN1LA6NDY0 278 aaKnown RBP4.12□□□□□ -1.75
BRCA2-202ENST00000470094 KRTAP29-1A8MX34 341 aaPredicted RBP4.12□□□□□ -1.75
BRCA2-202ENST00000470094 EBAG9O00559 213 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 IFIT1P09914 478 aaKnown RBP4.12□□□□□ -1.75
BRCA2-202ENST00000470094 TFPIP10646 304 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 MYF6P23409 242 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 TNFRSF8P28908 595 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 C21orf33P30042 268 aaPredicted RBP4.12□□□□□ -1.75
BRCA2-202ENST00000470094 TTKP33981 857 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 LIFRP42702 1097 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 MAPK9P45984 424 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 TLE2Q04725 743 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 ST3GAL1Q11201 340 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 RUNX2Q13950 521 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 PLCB4Q15147 1175 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 NFIL3Q16649 462 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 C17orf99Q6UX52 265 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 MOB3CQ70IA8 216 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 BHLHA9Q7RTU4 235 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 FJX1Q86VR8 437 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 SMAP1Q8IYB5 467 aaPredicted RBP4.12□□□□□ -1.75
BRCA2-202ENST00000470094 GPT2Q8TD30 523 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 USP13Q92995 863 aaPredicted RBP4.12□□□□□ -1.75
BRCA2-202ENST00000470094 OTULINQ96BN8 352 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 MAELQ96JY0 434 aaKnown RBP4.12□□□□□ -1.75
BRCA2-202ENST00000470094 MSTO1Q9BUK6 570 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 GPR63Q9BZJ6 419 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 TMEM51Q9NW97 253 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 ANKRD10Q9NXR5 420 aa4.12□□□□□ -1.75
BRCA2-202ENST00000470094 GOLGA6L10A0A0M3HER8 536 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 RRN3P2A6NIE6 340 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 GTPBP1O00178 669 aaKnown RBP4.11□□□□□ -1.75
BRCA2-202ENST00000470094 KCNJ13O60928 360 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 ATP2C2O75185 946 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 SERPINI2O75830 405 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 POLBP06746 335 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 CBSLP0DN79 551 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 PCNAP12004 261 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 PLA2G2AP14555 144 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 ZNF8P17098 575 aaPredicted RBP4.11□□□□□ -1.75
BRCA2-202ENST00000470094 PTPN2P17706 415 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms