RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PIWIL2Q8TC59 973 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PDCD6IPQ8WUM4 868 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF296Q8WUU4 475 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 RAD54LQ92698 747 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 NINJ1Q92982 152 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 POP5Q969H6 163 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 NCLNQ969V3 563 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 SH3YL1Q96HL8 342 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 METTL2AQ96IZ6 378 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 MAELQ96JY0 434 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 CNDP1Q96KN2 507 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 EGLN2Q96KS0 407 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 CEP295NLQ96MC4 621 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF578Q96N58 590 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 SAMD11Q96NU1 681 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 UHRF1Q96T88 793 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 HERC2P3Q9BVR0 1158 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 TEX13BQ9BXU2 312 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 DNAI2Q9GZS0 605 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 OR51B5Q9H339 312 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 TP63Q9H3D4 680 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 SNX25Q9H3E2 840 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PDZD7Q9H5P4 517 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PNPLA8Q9NP80 782 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 NECTIN3Q9NQS3 549 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ZC4H2Q9NQZ6 224 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 FBXO6Q9NRD1 293 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 C20orf96Q9NUD7 363 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 OLAHQ9NV23 265 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 DNAJC17Q9NVM6 304 aaKnown RBP4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ACTR10Q9NZ32 417 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 CRIM1Q9NZV1 1036 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 EMC3Q9P0I2 261 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF69Q9UC07 566 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PFDN2Q9UHV9 154 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 GLS2Q9UI32 602 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ANAPC2Q9UJX6 822 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF221Q9UK13 617 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 KIAA1257Q9ULG3 409 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 TRAF6Q9Y4K3 522 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PCDHGB3Q9Y5G1 929 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 SLC4A4Q9Y6R1 1079 aa4.92□□□□□ -1.62
SF3B1-207ENST00000468925 PSME4Q14997 1843 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 NPHP3-ACAD11A0A0J9YXS1 232 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 PNMA8CA0A1B0GUJ8 204 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 RGSL1A5PLK6 1076 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 MEI4A8MW99 385 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 KLRF2D3W0D1 207 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 POC1B-GALNT4F8VUJ3 575 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 SLCO1B7G3V0H7 640 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 COPEO14579 308 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 PMM2O15305 246 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 NCAM2O15394 837 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 B4GALT4O60513 344 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TMCC2O75069 709 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 SNNO75324 88 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TRIM3O75382 744 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF254O75437 659 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 MAFO75444 373 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TADA2AO75478 443 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TOM1L1O75674 476 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 USP1O94782 785 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 WDPCPO95876 746 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ECDO95905 644 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 F2P00734 622 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 CYP1A2P05177 515 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 CAPN1P07384 714 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 YES1P07947 543 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 KRT7P08729 469 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 FCER1AP12319 257 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 HOXB6P17509 224 aaKnown RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 PRKACAP17612 351 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 DDX5P17844 614 aaKnown RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 PTPN1P18031 435 aaKnown RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ATF6P18850 670 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 COMTP21964 271 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 FBLN1P23142 703 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ADRA1DP25100 572 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 GSTM2P28161 218 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 CHKAP35790 457 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 GNPDA1P46926 289 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 HLCSP50747 726 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 PRKAA2P54646 552 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 MLLT6P55198 1093 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 CASP7P55210 303 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TMPRSS15P98073 1019 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 IFITM2Q01629 132 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 GHRHRQ02643 423 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 TNFAIP2Q03169 654 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 ENPEPQ07075 957 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 IKZF1Q13422 519 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 POU6F1Q14863 301 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 MLC1Q15049 377 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 PDK1Q15118 436 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 DLG2Q15700 870 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 NPY5RQ15761 445 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 PKN2Q16513 984 aaKnown RBP4.91□□□□□ -1.62
SF3B1-207ENST00000468925 PROSER3Q2NL68 480 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 CYP27C1Q4G0S4 372 aa4.91□□□□□ -1.62
SF3B1-207ENST00000468925 CCDC58Q4VC31 144 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms