RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 ANO6Q4KMQ2 910 aa17.77■□□□□ 0.44
COL7A1-206ENST00000466591 LRRC73Q5JTD7 316 aa17.77■□□□□ 0.44
COL7A1-206ENST00000466591 KDM7AQ6ZMT4 941 aa17.77■□□□□ 0.44
COL7A1-206ENST00000466591 VPS36Q86VN1 386 aa17.77■□□□□ 0.44
COL7A1-206ENST00000466591 SLC25A45Q8N413 288 aa17.77■□□□□ 0.44
COL7A1-206ENST00000466591 BAP1Q92560 729 aa17.77■□□□□ 0.44
COL7A1-206ENST00000466591 TSC1Q92574 1164 aa17.77■□□□□ 0.44
COL7A1-206ENST00000466591 HMCESQ96FZ2 354 aa17.77■□□□□ 0.44
COL7A1-206ENST00000466591 MAGEB5Q9BZ81 275 aa17.77■□□□□ 0.44
COL7A1-206ENST00000466591 TTYH3Q9C0H2 523 aa17.77■□□□□ 0.44
COL7A1-206ENST00000466591 DHX35Q9H5Z1 703 aaKnown RBP17.77■□□□□ 0.44
COL7A1-206ENST00000466591 NLGN3Q9NZ94 848 aa17.77■□□□□ 0.44
COL7A1-206ENST00000466591 UBA2Q9UBT2 640 aaPredicted RBP17.77■□□□□ 0.44
COL7A1-206ENST00000466591 FZD10Q9ULW2 581 aa17.77■□□□□ 0.44
COL7A1-206ENST00000466591 ZFHX4Q86UP3 3567 aa17.77■□□□□ 0.43
COL7A1-206ENST00000466591 POM121BA6NF01 834 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 CAPNS1P04632 268 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 JUNDP17535 347 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 ABL2P42684 1182 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 ABCG1P45844 678 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 RPL7AP62424 266 aaKnown RBP17.76■□□□□ 0.43
COL7A1-206ENST00000466591 TPM4P67936 248 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 CAMK2BQ13554 666 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 PROX2Q3B8N5 592 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 KANSL1Q7Z3B3 1105 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 PDZD3Q86UT5 571 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 MCOLN2Q8IZK6 566 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 SLC22A18ASQ8N1D0 253 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 DENND6BQ8NEG7 585 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 LMX1AQ8TE12 382 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 BTN2A2Q8WVV5 523 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 EXOC2Q96KP1 924 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 IL12RB2Q99665 862 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 WRAP53Q9BUR4 548 aaKnown RBP17.76■□□□□ 0.43
COL7A1-206ENST00000466591 NCKIPSDQ9NZQ3 722 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 DOLKQ9UPQ8 538 aa17.76■□□□□ 0.43
COL7A1-206ENST00000466591 EEF2KO00418 725 aaKnown RBP17.75■□□□□ 0.43
COL7A1-206ENST00000466591 RAD51BO15315 384 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 NEBLO76041 1014 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 ATP1A3P13637 1013 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 ELP6Q0PNE2 266 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 GRM3Q14832 879 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 INO80DQ53TQ3 878 aaPredicted RBP17.75■□□□□ 0.43
COL7A1-206ENST00000466591 ERAP2Q6P179 960 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 NETO2Q8NC67 525 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 ZNF548Q8NEK5 533 aaPredicted RBP17.75■□□□□ 0.43
COL7A1-206ENST00000466591 GLMNQ92990 594 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 BMFQ96LC9 184 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 APOLD1Q96LR9 279 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 DEPDC7Q96QD5 511 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 SLC13A1Q9BZW2 595 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 SP110Q9HB58 689 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 SCUBE2Q9NQ36 999 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 GGT7Q9UJ14 662 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 MYO6Q9UM54 1294 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 AP4E1Q9UPM8 1137 aa17.75■□□□□ 0.43
COL7A1-206ENST00000466591 SPTY2D1-AS1A0A0U1RR47 76 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 ARHGAP42A6NI28 874 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 LRRC10BA6NIK2 292 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 SCAMP1O15126 338 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 PRPSAP2O60256 369 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 MMP20O60882 483 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 CD160O95971 181 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 MT-CO3P00414 261 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 SERPINC1P01008 464 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 HTR7P34969 479 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 INSM1Q01101 510 aaPredicted RBP17.74■□□□□ 0.43
COL7A1-206ENST00000466591 PPP6R3Q5H9R7 873 aaPredicted RBP17.74■□□□□ 0.43
COL7A1-206ENST00000466591 FAXCQ5TGI0 409 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 ZCCHC8Q6NZY4 707 aaKnown RBP17.74■□□□□ 0.43
COL7A1-206ENST00000466591 DNAAF5Q86Y56 855 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 MAPK15Q8TD08 544 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 VCPIP1Q96JH7 1222 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 LENG8Q96PV6 779 aaPredicted RBP17.74■□□□□ 0.43
COL7A1-206ENST00000466591 C1QTNF2Q9BXJ5 285 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 NRSN2Q9GZP1 204 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 SYNDIG1Q9H7V2 258 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 USP29Q9HBJ7 922 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 GPATCH2LQ9NWQ4 482 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 SPASTQ9UBP0 616 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 APOBEC3BQ9UH17 382 aaKnown RBP17.74■□□□□ 0.43
COL7A1-206ENST00000466591 PCSK1NQ9UHG2 260 aa17.74■□□□□ 0.43
COL7A1-206ENST00000466591 CPED1A4D0V7 1026 aa17.73■□□□□ 0.43
COL7A1-206ENST00000466591 LRRC53A6NM62 1247 aa17.73■□□□□ 0.43
COL7A1-206ENST00000466591 K7ESM1 405 aa17.73■□□□□ 0.43
COL7A1-206ENST00000466591 DFFAO00273 331 aa17.73■□□□□ 0.43
COL7A1-206ENST00000466591 ATMINO43313 823 aaPredicted RBP17.73■□□□□ 0.43
COL7A1-206ENST00000466591 AQP9O43315 295 aa17.73■□□□□ 0.43
COL7A1-206ENST00000466591 CSF2P04141 144 aa17.73■□□□□ 0.43
COL7A1-206ENST00000466591 CKMT1AP12532 417 aa17.73■□□□□ 0.43
COL7A1-206ENST00000466591 NME1P15531 152 aaKnown RBP17.73■□□□□ 0.43
COL7A1-206ENST00000466591 ACTN2P35609 894 aa17.73■□□□□ 0.43
COL7A1-206ENST00000466591 RPIAP49247 311 aa17.73■□□□□ 0.43
COL7A1-206ENST00000466591 SERINC3Q13530 473 aa17.73■□□□□ 0.43
COL7A1-206ENST00000466591 FGL2Q14314 439 aa17.73■□□□□ 0.43
COL7A1-206ENST00000466591 FZD2Q14332 565 aa17.73■□□□□ 0.43
COL7A1-206ENST00000466591 NCAPHQ15003 741 aa17.73■□□□□ 0.43
COL7A1-206ENST00000466591 IFI44Q8TCB0 444 aa17.73■□□□□ 0.43
COL7A1-206ENST00000466591 CELF6Q96J87 481 aaKnown RBP17.73■□□□□ 0.43
COL7A1-206ENST00000466591 CINPQ9BW66 212 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 288.1 ms