RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 PELI3Q8N2H9 469 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.55□□□□□ -1.36
SIK3-207ENST00000465421 MAELQ96JY0 434 aaKnown RBP6.55□□□□□ -1.36
SIK3-207ENST00000465421 CGRRF1Q99675 332 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 GATA5Q9BWX5 397 aaPredicted RBP6.55□□□□□ -1.36
SIK3-207ENST00000465421 IMPG2Q9BZV3 1241 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 ILKAPQ9H0C8 392 aaPredicted RBP6.55□□□□□ -1.36
SIK3-207ENST00000465421 RAB6CQ9H0N0 254 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 RPAP3Q9H6T3 665 aaPredicted RBP6.55□□□□□ -1.36
SIK3-207ENST00000465421 SNX15Q9NRS6 342 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.55□□□□□ -1.362e-6■□□□□ 8.9
SIK3-207ENST00000465421 SFMBT1Q9UHJ3 866 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 C1orf232A0A0U1RR37 186 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 ACOX3O15254 700 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 MSI1O43347 362 aaKnown RBP6.55□□□□□ -1.36
SIK3-207ENST00000465421 TRIM13O60858 407 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 ASS1P00966 412 aaKnown RBP6.55□□□□□ -1.36
SIK3-207ENST00000465421 ALOX5P09917 674 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 C7P10643 843 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 PTPRAP18433 802 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 TGM2P21980 687 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 EDNRBP24530 442 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 HOXD11P31277 338 aaPredicted RBP6.55□□□□□ -1.36
SIK3-207ENST00000465421 CCR10P46092 362 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 HLCSP50747 726 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 PGGT1BP53609 377 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 EIF2B5Q13144 721 aaKnown RBP6.55□□□□□ -1.36
SIK3-207ENST00000465421 SEMA5AQ13591 1074 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 CBX2Q14781 532 aaPredicted RBP6.55□□□□□ -1.36
SIK3-207ENST00000465421 ATP6AP1Q15904 470 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 Q3C1V9 767 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 INAVAQ3KP66 663 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 MTERF2Q49AM1 385 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 NXNQ6DKJ4 435 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 C4orf22Q6V702 233 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 CATSPERGQ6ZRH7 1159 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 SPRED1Q7Z699 444 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 ITIH5Q86UX2 942 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 CBR4Q8N4T8 237 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 KIAA1958Q8N8K9 716 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 ABHD11Q8NFV4 315 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 USP33Q8TEY7 942 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 TMEM143Q96AN5 459 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 HERC2P3Q9BVR0 1158 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 NIFKQ9BYG3 293 aaKnown RBP6.55□□□□□ -1.36
SIK3-207ENST00000465421 YTHDF1Q9BYJ9 559 aaKnown RBP6.55□□□□□ -1.36
SIK3-207ENST00000465421 CEP41Q9BYV8 373 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 LHX5Q9H2C1 402 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 CD320Q9NPF0 282 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 MRPL40Q9NQ50 206 aaKnown RBP6.55□□□□□ -1.36
SIK3-207ENST00000465421 AGPAT4Q9NRZ5 378 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 TMEM181Q9P2C4 612 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 ZDHHC2Q9UIJ5 367 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 PSME2Q9UL46 239 aa6.55□□□□□ -1.36
SIK3-207ENST00000465421 NRP1O14786 923 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 SEC24DO94855 1032 aaPredicted RBP6.54□□□□□ -1.36
SIK3-207ENST00000465421 BCL10O95999 233 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 CST3P01034 146 aaPredicted RBP6.54□□□□□ -1.36
SIK3-207ENST00000465421 SBK3P0C264 359 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 FOSL1P15407 271 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 TFEBP19484 476 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 PTPN9P43378 593 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 ARCN1P48444 511 aaKnown RBP6.54□□□□□ -1.36
SIK3-207ENST00000465421 CDH6P55285 790 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 ARPC4P59998 168 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 ZBTB17Q13105 803 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 TFDP2Q14188 446 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 SKIV2LQ15477 1246 aaKnown RBP6.54□□□□□ -1.36
SIK3-207ENST00000465421 GPR162Q16538 588 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 KIZQ2M2Z5 673 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 TIGD2Q4W5G0 525 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 FAM209AQ5JX71 171 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 SH3PXD2AQ5TCZ1 1133 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 C9orf131Q5VYM1 1079 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 TRNP1Q6NT89 227 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 CMC1Q7Z7K0 106 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 CAMK1DQ8IU85 385 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 LSMEM2Q8N112 164 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 PNPT1Q8TCS8 783 aaKnown RBP6.54□□□□□ -1.36
SIK3-207ENST00000465421 SNX19Q92543 992 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 FKBP10Q96AY3 582 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 FBXL20Q96IG2 436 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 CDHR1Q96JP9 859 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 CPXM1Q96SM3 734 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 APBA2Q99767 749 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 IL22Q9GZX6 179 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 SMARCAD1Q9H4L7 1026 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 RAVER2Q9HCJ3 691 aaKnown RBP6.54□□□□□ -1.36
SIK3-207ENST00000465421 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.54□□□□□ -1.36
SIK3-207ENST00000465421 CACNA2D2Q9NY47 1150 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 ADA2Q9NZK5 511 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 SEPT9Q9UHD8 586 aaPredicted RBP6.54□□□□□ -1.36
SIK3-207ENST00000465421 KLF15Q9UIH9 416 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 SLC27A5Q9Y2P5 690 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 HES2Q9Y543 173 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 PCDHGB3Q9Y5G1 929 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 MAFBQ9Y5Q3 323 aaPredicted RBP6.54□□□□□ -1.36
SIK3-207ENST00000465421 HEATR9A2RTY3 570 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 GLTPD2A6NH11 291 aa6.54□□□□□ -1.36
SIK3-207ENST00000465421 A6NJY4 79 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms