RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 RASA4O43374 803 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 CST8O60676 142 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 CER1O95813 267 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 APOC2P02655 101 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 DLDP09622 509 aaKnown RBP17.75■□□□□ 0.43
CPSF4-209ENST00000465132 C7P10643 843 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 CD70P32970 193 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 VASPP50552 380 aaPredicted RBP17.75■□□□□ 0.43
CPSF4-209ENST00000465132 CLCN6P51797 869 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 ECT2LQ008S8 904 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 MMRN1Q13201 1228 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 FNDC3BQ53EP0 1204 aaKnown RBP17.75■□□□□ 0.43
CPSF4-209ENST00000465132 IL27RAQ6UWB1 636 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 ATPAF2Q8N5M1 289 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 PNPLA1Q8N8W4 532 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 ARHGEF2Q92974 986 aaKnown RBP17.75■□□□□ 0.43
CPSF4-209ENST00000465132 RNF14Q9UBS8 474 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 APOBEC2Q9Y235 224 aaKnown RBP17.75■□□□□ 0.43
CPSF4-209ENST00000465132 FNDC3AQ9Y2H6 1198 aaKnown RBP17.75■□□□□ 0.43
CPSF4-209ENST00000465132 CKAP5Q14008 2032 aa17.75■□□□□ 0.43
CPSF4-209ENST00000465132 SPEGQ15772 3267 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 CHD5Q8TDI0 1954 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 CBX4O00257 560 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 DFFAO00273 331 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 KDELR3O43731 214 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 IRAK1P51617 712 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 SERINC3Q13530 473 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 RFTN1Q14699 578 aaPredicted RBP17.74■□□□□ 0.43
CPSF4-209ENST00000465132 HLA-BQ31612 363 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 FSCBQ5H9T9 825 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 NCBP2-AS2Q69YL0 99 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 ADIPOR2Q86V24 386 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 PLD5Q8N7P1 536 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 ZNF366Q8N895 744 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 SETD7Q8WTS6 366 aaKnown RBP17.74■□□□□ 0.43
CPSF4-209ENST00000465132 CYB5D2Q8WUJ1 264 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 CCDC114Q96M63 670 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 ZNF599Q96NL3 588 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 ACE2Q9BYF1 805 aaPredicted RBP17.74■□□□□ 0.43
CPSF4-209ENST00000465132 C6orf106Q9H6K1 298 aaPredicted RBP17.74■□□□□ 0.43
CPSF4-209ENST00000465132 LRRC19Q9H756 370 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 SP110Q9HB58 689 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 TM7SF3Q9NS93 570 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 SNX12Q9UMY4 172 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 HEY1Q9Y5J3 304 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 SAR1BQ9Y6B6 198 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 PKD1L2Q7Z442 2459 aa17.74■□□□□ 0.43
CPSF4-209ENST00000465132 HACD1B0YJ81 288 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 ENC1O14682 589 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 CEP104O60308 925 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 NEBLO76041 1014 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 ACSL1P33121 698 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 DEKP35659 375 aaKnown RBP17.73■□□□□ 0.43
CPSF4-209ENST00000465132 CSNK1EP49674 416 aaKnown RBP17.73■□□□□ 0.43
CPSF4-209ENST00000465132 DYNLT1P63172 113 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 IL10RBQ08334 325 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 XRCC4Q13426 336 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 PTPRNQ16849 979 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 AFMIDQ63HM1 303 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 CCNI2Q6ZMN8 369 aaPredicted RBP17.73■□□□□ 0.43
CPSF4-209ENST00000465132 SLCO6A1Q86UG4 719 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 PROSER1Q86XN7 944 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 PQLC3Q8N755 202 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 FATE1Q969F0 183 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 LMLNQ96KR4 655 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 SUN2Q9UH99 717 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 FARP1Q9Y4F1 1045 aaPredicted RBP17.73■□□□□ 0.43
CPSF4-209ENST00000465132 OR51B4Q9Y5P0 310 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 SLCO1B1Q9Y6L6 691 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 CACNA1GO43497 2377 aa17.73■□□□□ 0.43
CPSF4-209ENST00000465132 GOLGA6L10A0A0M3HER8 536 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 A0A1B0GVT2 93 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 KRT10P13645 584 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 CCNCP24863 283 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 MZF1P28698 734 aaPredicted RBP17.72■□□□□ 0.43
CPSF4-209ENST00000465132 PAFAH1B1P43034 410 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 PAPOLAP51003 745 aaKnown RBP17.72■□□□□ 0.43
CPSF4-209ENST00000465132 AFF3P51826 1226 aaKnown RBP17.72■□□□□ 0.43
CPSF4-209ENST00000465132 ZBTB16Q05516 673 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 GALNT2Q10471 571 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 TUBB2AQ13885 445 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 INO80DQ53TQ3 878 aaPredicted RBP17.72■□□□□ 0.43
CPSF4-209ENST00000465132 ARTNQ5T4W7 220 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 PAPD7Q5XG87 772 aaKnown RBP17.72■□□□□ 0.43
CPSF4-209ENST00000465132 DBX2Q6ZNG2 339 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 NYAP1Q6ZVC0 841 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 BAHD1Q8TBE0 780 aaPredicted RBP17.72■□□□□ 0.43
CPSF4-209ENST00000465132 WFDC5Q8TCV5 224 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 SNX19Q92543 992 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 CELF6Q96J87 481 aaKnown RBP17.72■□□□□ 0.43
CPSF4-209ENST00000465132 C16orf45Q96MC5 204 aaPredicted RBP17.72■□□□□ 0.43
CPSF4-209ENST00000465132 OSBPL9Q96SU4 736 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 TUBB2BQ9BVA1 445 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 HEMGNQ9BXL5 484 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 CEP44Q9C0F1 390 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 SLC39A8Q9C0K1 460 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 FBRSQ9HAH7 460 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 PRSS16Q9NQE7 514 aa17.72■□□□□ 0.43
CPSF4-209ENST00000465132 IPO11Q9UI26 975 aaKnown RBP17.72■□□□□ 0.43
CPSF4-209ENST00000465132 TTC7AQ9ULT0 858 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms