RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, human

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGB1-208	ENST00000464001	CCT5	P48643	541 aa		4.38	□□□□□ -1.71
ITGB1-208	ENST00000464001	EIF5	P55010	431 aa	Known RBP	4.38	□□□□□ -1.71
ITGB1-208	ENST00000464001	PFKFB4	Q16877	469 aa		4.38	□□□□□ -1.71
ITGB1-208	ENST00000464001	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.38	□□□□□ -1.71
ITGB1-208	ENST00000464001	PATL1	Q86TB9	770 aa	Known RBP	4.38	□□□□□ -1.71
ITGB1-208	ENST00000464001	TMC8	Q8IU68	726 aa		4.38	□□□□□ -1.71
ITGB1-208	ENST00000464001	SCAMP5	Q8TAC9	235 aa		4.38	□□□□□ -1.71
ITGB1-208	ENST00000464001	SNRNP27	Q8WVK2	155 aa	Known RBP	4.38	□□□□□ -1.71
ITGB1-208	ENST00000464001	INPP4A	Q96PE3	977 aa	Predicted RBP	4.38	□□□□□ -1.71
ITGB1-208	ENST00000464001	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	4.38	□□□□□ -1.71
ITGB1-208	ENST00000464001	PRDM8	Q9NQV8	689 aa		4.38	□□□□□ -1.71
ITGB1-208	ENST00000464001	LRCH1	Q9Y2L9	728 aa		4.38	□□□□□ -1.71
ITGB1-208	ENST00000464001	GPR52	Q9Y2T5	361 aa		4.38	□□□□□ -1.71
ITGB1-208	ENST00000464001		A0A0A0MQY5	61 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	IGLV5-52	A0A0A0MRZ9	124 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	DDTL	A6NHG4	134 aa	Predicted RBP	4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001		J3KRW8	73 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	CLDN7	O95471	211 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	TFRC	P02786	760 aa	Known RBP	4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	PYGL	P06737	847 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	CHKA	P35790	457 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	DPP6	P42658	865 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	TBX2	Q13207	712 aa	Predicted RBP	4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	C1orf122	Q6ZSJ8	110 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	RSRC2	Q7L4I2	434 aa	Known RBP	4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	KRT77	Q7Z794	578 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	MYLK4	Q86YV6	388 aa	Predicted RBP	4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	RBFA	Q8N0V3	343 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	CCT6B	Q92526	530 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	TMEM18	Q96B42	140 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	TBATA	Q96M53	351 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	CLPB	Q9H078	707 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	IL25	Q9H293	177 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	PABPC3	Q9H361	631 aa	Known RBP	4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	ABHD16B	Q9H3Z7	469 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	DHDH	Q9UQ10	334 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001	RCE1	Q9Y256	329 aa		4.37	□□□□□ -1.71
ITGB1-208	ENST00000464001		A0A0B4J293	547 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001		A0A1B0GVM2	712 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	SYT5	O00445	386 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	STRN	O43815	780 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	LYL1	P12980	280 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	CHN1	P15882	459 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	CALR	P27797	417 aa	Known RBP	4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	RXRG	P48443	463 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	DLX5	P56178	289 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	BNC1	Q01954	994 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	MZT2B	Q6NZ67	158 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	TRIM74	Q86UV6	250 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	TRIM73	Q86UV7	250 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	TMPRSS12	Q86WS5	348 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	BRSK2	Q8IWQ3	736 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	RFLNB	Q8N5W9	214 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	SCAI	Q8N9R8	606 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	FSIP1	Q8NA03	581 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	SPATA5	Q8NB90	893 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	HES6	Q96HZ4	224 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	TXNDC15	Q96J42	360 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	WDR12	Q9GZL7	423 aa	Known RBP	4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	LHPP	Q9H008	270 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	ACAD9	Q9H845	621 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	RRN3	Q9NYV6	651 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001	UPB1	Q9UBR1	384 aa		4.36	□□□□□ -1.71
ITGB1-208	ENST00000464001		A0A087WV62	115 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001		A0A096LPK6	155 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	KDM4E	B2RXH2	506 aa	Predicted RBP	4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	BUB3	O43684	328 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	PLG	P00747	810 aa	Predicted RBP	4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	F7	P08709	466 aa	Predicted RBP	4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	CKMT1A	P12532	417 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	YWHAQ	P27348	245 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	SERPINF1	P36955	418 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	GPR12	P47775	334 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	PEX5	P50542	639 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	NUCB1	Q02818	461 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	ZRSR1	Q15695	479 aa	Known RBP	4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	FAM180B	Q6P0A1	224 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	ANKRD23	Q86SG2	305 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	GALNT15	Q8N3T1	639 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	MYCT1	Q8N699	235 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	LILRB1	Q8NHL6	650 aa	Predicted RBP	4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	TRAPPC9	Q96Q05	1148 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	RIC8A	Q9NPQ8	531 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	SMC4	Q9NTJ3	1288 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	THAP1	Q9NVV9	213 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001	FBXO40	Q9UH90	709 aa		4.35	□□□□□ -1.71
ITGB1-208	ENST00000464001		A0A1B0GVC2	190 aa		4.34	□□□□□ -1.71
ITGB1-208	ENST00000464001	SOCS5	O75159	536 aa		4.34	□□□□□ -1.71
ITGB1-208	ENST00000464001	CYP21A2	P08686	494 aa		4.34	□□□□□ -1.71
ITGB1-208	ENST00000464001	IFIT1	P09914	478 aa	Known RBP	4.34	□□□□□ -1.71
ITGB1-208	ENST00000464001	AVPR2	P30518	371 aa		4.34	□□□□□ -1.71
ITGB1-208	ENST00000464001	GRK6	P43250	576 aa		4.34	□□□□□ -1.71
ITGB1-208	ENST00000464001	MXI1	P50539	228 aa		4.34	□□□□□ -1.71
ITGB1-208	ENST00000464001	PNLIPRP1	P54315	467 aa		4.34	□□□□□ -1.71
ITGB1-208	ENST00000464001	TNFAIP2	Q03169	654 aa		4.34	□□□□□ -1.71
ITGB1-208	ENST00000464001	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
ITGB1-208	ENST00000464001	CTTN	Q14247	550 aa	Known RBP	4.34	□□□□□ -1.71
ITGB1-208	ENST00000464001	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms