RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 PDFQ9HBH1 243 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 ZNHIT6Q9NWK9 470 aaKnown RBP16.35■□□□□ 0.21
COL7A1-203ENST00000459756 CWC15Q9P013 229 aaKnown RBP16.35■□□□□ 0.21
COL7A1-203ENST00000459756 NENFQ9UMX5 172 aa16.35■□□□□ 0.21
COL7A1-203ENST00000459756 ZFR2Q9UPR6 939 aaKnown RBP16.35■□□□□ 0.21
COL7A1-203ENST00000459756 J3KR12 359 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 MYO1FO00160 1098 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 TCF4P15884 667 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 IL1R2P27930 398 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 ARL4AP40617 200 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 RXRGP48443 463 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 IL9RQ01113 521 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 GRM3Q14832 879 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 CYTH1Q15438 398 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 SLC18A3Q16572 532 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 TSR1Q2NL82 804 aaKnown RBP16.34■□□□□ 0.21
COL7A1-203ENST00000459756 SMTNL2Q2TAL5 461 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 PRAMEF14Q5SWL7 426 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 SPATS2Q86XZ4 545 aaKnown RBP16.34■□□□□ 0.21
COL7A1-203ENST00000459756 VSTM4Q8IW00 320 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 ARHGAP12Q8IWW6 846 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 FAM174AQ8TBP5 190 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 KLHDC7BQ96G42 594 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 KLHL32Q96NJ5 620 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 SLC17A9Q9BYT1 436 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL7A1-203ENST00000459756 DKK3Q9UBP4 350 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 LHX3Q9UBR4 397 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 APOBEC2Q9Y235 224 aaKnown RBP16.34■□□□□ 0.21
COL7A1-203ENST00000459756 BTBD3Q9Y2F9 522 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 TRPM6Q9BX84 2022 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 SPEGQ15772 3267 aa16.34■□□□□ 0.21
COL7A1-203ENST00000459756 NEMP1O14524 444 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 FTH1P19P0C7X4 201 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 RARAP10276 462 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 ABL2P42684 1182 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 SHBQ15464 509 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 POLNQ7Z5Q5 900 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 TTC7BQ86TV6 843 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 NPWQ8N729 165 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 NETO2Q8NC67 525 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 SAP25Q8TEE9 199 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 HSPH1Q92598 858 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 BTBD6Q96KE9 485 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 MYOCQ99972 504 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 SCNM1Q9BWG6 230 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 DEF6Q9H4E7 631 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 CA5BQ9Y2D0 317 aa16.33■□□□□ 0.2
COL7A1-203ENST00000459756 SSU72P8A0A1W2PR75 194 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 DFFAO00273 331 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 AREL1O15033 823 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 HYAL3O43820 417 aaPredicted RBP16.32■□□□□ 0.2
COL7A1-203ENST00000459756 PALMO75781 387 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 TOP3BO95985 862 aaKnown RBP16.32■□□□□ 0.2
COL7A1-203ENST00000459756 ITGAVP06756 1048 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 THEGLP0DJG4 465 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 EPHA8P29322 1005 aaPredicted RBP16.32■□□□□ 0.2
COL7A1-203ENST00000459756 SUOXP51687 545 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 SLC25A11Q02978 314 aaKnown RBP16.32■□□□□ 0.2
COL7A1-203ENST00000459756 IL10RBQ08334 325 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 SGCGQ13326 291 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
COL7A1-203ENST00000459756 RFTN1Q14699 578 aaPredicted RBP16.32■□□□□ 0.2
COL7A1-203ENST00000459756 ASTE1Q2TB18 679 aaPredicted RBP16.32■□□□□ 0.2
COL7A1-203ENST00000459756 FRYQ5TBA9 3013 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 TMCO3Q6UWJ1 677 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 RAB44Q7Z6P3 723 aaPredicted RBP16.32■□□□□ 0.2
COL7A1-203ENST00000459756 ABI3BPQ7Z7G0 1075 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 GATAD2AQ86YP4 633 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 ZNF564Q8TBZ8 553 aaPredicted RBP16.32■□□□□ 0.2
COL7A1-203ENST00000459756 HCAR2Q8TDS4 363 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 ASB12Q8WXK4 309 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 ADAMTS14Q8WXS8 1223 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 CTNNBL1Q8WYA6 563 aaPredicted RBP16.32■□□□□ 0.2
COL7A1-203ENST00000459756 EXOC2Q96KP1 924 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 CSPG4P5Q96PW8 444 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 C1QTNF2Q9BXJ5 285 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 SP110Q9HB58 689 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 FZD3Q9NPG1 666 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 ABHD10Q9NUJ1 306 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 CTTNBP2NLQ9P2B4 639 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 UVRAGQ9P2Y5 699 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 LCMT1Q9UIC8 334 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 NEUROG3Q9Y4Z2 214 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 HS3ST3A1Q9Y663 406 aa16.32■□□□□ 0.2
COL7A1-203ENST00000459756 INSIG1O15503 277 aa16.31■□□□□ 0.2
COL7A1-203ENST00000459756 TNFSF14O43557 240 aa16.31■□□□□ 0.2
COL7A1-203ENST00000459756 AKR1B10O60218 316 aa16.31■□□□□ 0.2
COL7A1-203ENST00000459756 MFAP3LO75121 409 aa16.31■□□□□ 0.2
COL7A1-203ENST00000459756 PAK4O96013 591 aaPredicted RBP16.31■□□□□ 0.2
COL7A1-203ENST00000459756 H2AFZP0C0S5 128 aa16.31■□□□□ 0.2
COL7A1-203ENST00000459756 SPINK2P20155 84 aa16.31■□□□□ 0.2
COL7A1-203ENST00000459756 AMPD1P23109 780 aa16.31■□□□□ 0.2
COL7A1-203ENST00000459756 CSNK1DP48730 415 aa16.31■□□□□ 0.2
COL7A1-203ENST00000459756 FGL2Q14314 439 aa16.31■□□□□ 0.2
COL7A1-203ENST00000459756 HADHQ16836 314 aaKnown RBP16.31■□□□□ 0.2
COL7A1-203ENST00000459756 TXNRD3NBQ6F5E7 133 aa16.31■□□□□ 0.2
COL7A1-203ENST00000459756 H2AFVQ71UI9 128 aa16.31■□□□□ 0.2
COL7A1-203ENST00000459756 SLCO6A1Q86UG4 719 aa16.31■□□□□ 0.2
COL7A1-203ENST00000459756 DCP2Q8IU60 420 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms