RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 DCAF12Q5T6F0 453 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 ATP1A1-AS1Q5TC04 95 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 OGFOD3Q6PK18 319 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 RD3Q7Z3Z2 195 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 CIR1Q86X95 450 aaPredicted RBP12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 TP53INP2Q8IXH6 220 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 UNC5BQ8IZJ1 945 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 NLGN4XQ8N0W4 816 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 PDILTQ8N807 584 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 AGBL5Q8NDL9 886 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 NLGN4YQ8NFZ3 816 aaPredicted RBP12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 DQX1Q8TE96 717 aaKnown RBP12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 STARD8Q92502 1023 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 TSACCQ96A04 125 aaPredicted RBP12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 BTN2A3PQ96KV6 586 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 C5orf34Q96MH7 638 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 TNMDQ9H2S6 317 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 CISHQ9NSE2 258 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 DMAC2Q9NW81 257 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 TLK1Q9UKI8 766 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 PHTF1Q9UMS5 762 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 PCDHB3Q9Y5E6 796 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 APCP25054 2843 aa12.79□□□□□ -0.36
AC004540.1-204ENST00000449537 IGHV5-10-1A0A0J9YXX1 117 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 ARHGAP10A1A4S6 786 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 K7ERQ8 282 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 PIK3R2O00459 728 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 B4GAT1O43505 415 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 RASGRP1O95267 797 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 CSTF2P33240 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 KRT83P78385 493 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 KRT85P78386 507 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 AMZ1Q400G9 498 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 ZC3H12AQ5D1E8 599 aaKnown RBP12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 RABGAP1LQ5R372 815 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 C1orf220Q5T0J3 134 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 TTC39BQ5VTQ0 682 aaPredicted RBP12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 KDELC2Q7Z4H8 507 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 VPS36Q86VN1 386 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 NRSN1Q8IZ57 195 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 FAM46DQ8NEK8 389 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 TAS1R2Q8TE23 839 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 SLC29A3Q9BZD2 475 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 CYP4F12Q9HCS2 524 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 SLC12A6Q9UHW9 1150 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 CFAP45Q9UL16 551 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 SLC5A6Q9Y289 635 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 OR51B4Q9Y5P0 310 aa12.78□□□□□ -0.36
AC004540.1-204ENST00000449537 TMEM110-MUSTN1A8MSY1 372 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 SMAD6O43541 496 aaKnown RBP12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 NUDT21O43809 227 aaKnown RBP12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 RFPL1O75677 317 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 YEATS4O95619 227 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 SETSIPP0DME0 302 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 IGFALSP35858 605 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 GCLMP48507 274 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 RGS7P49802 495 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 ABHD18Q0P651 414 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 TRA2AQ13595 282 aaKnown RBP eCLIP12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 INPP5JQ15735 1006 aaPredicted RBP12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 CLPPQ16740 277 aaPredicted RBP12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 ZXDCQ2QGD7 858 aaPredicted RBP12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 ALG11Q2TAA5 492 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 EDRF1Q3B7T1 1238 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 C14orf28Q4W4Y0 310 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 CEP135Q66GS9 1140 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 DPY19L3Q6ZPD9 716 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 SLC9A9Q8IVB4 645 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 OR52K2Q8NGK3 314 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 RAB7BQ96AH8 199 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 FAXDC2Q96IV6 333 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 CCDC74BQ96LY2 380 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 TEFMQ96QE5 360 aaKnown RBP12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 SPRY4Q9C004 299 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 MUC3BQ9H195 1237 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 RUBCNLQ9H714 662 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 SLC39A2Q9NP94 309 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 KBTBD4Q9NVX7 518 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 ENTPD4Q9Y227 616 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 CLIC4Q9Y696 253 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 WASF2Q9Y6W5 498 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 MTORP42345 2549 aa12.77□□□□□ -0.37
AC004540.1-204ENST00000449537 CELSR1Q9NYQ6 3014 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 SPENQ96T58 3664 aaKnown RBP12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 KCNU1A8MYU2 1149 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 ZW10O43264 779 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 GABBR2O75899 941 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 ENDOD1O94919 500 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 PDGFAP04085 211 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 FYNP06241 537 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 CD19P15391 556 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 RRM1P23921 792 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 ALDH4A1P30038 563 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 LEPRP48357 1165 aaKnown RBP12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 PEX5P50542 639 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 VAMP7P51809 220 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 OR1D5P58170 312 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 RAB15P59190 212 aa12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 SRP54P61011 504 aaKnown RBP12.76□□□□□ -0.37
AC004540.1-204ENST00000449537 PKP1Q13835 747 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms