RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ANKRD22Q5VYY1 191 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 MAP1SQ66K74 1059 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 CYP4V2Q6ZWL3 525 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 GALNT13Q8IUC8 556 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 AFAP1L2Q8N4X5 818 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 TAB3Q8N5C8 712 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 ANKRD60Q9BZ19 345 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 ANGPTL3Q9Y5C1 460 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 PCDHGA8Q9Y5G5 932 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 CFLARO15519 480 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 TMCC2O75069 709 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 HOXD10P28358 340 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 GABRB2P47870 512 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 PKNOX1P55347 436 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 CCNA1P78396 465 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 TNFAIP2Q03169 654 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 CHRNEQ04844 493 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 SPCS2Q15005 226 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 FAM102AQ5T9C2 384 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 TIFABQ6ZNK6 161 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 AKAP14Q86UN6 197 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 BCO2Q9BYV7 579 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 RPF1Q9H9Y2 349 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 KLQ9UEF7 1012 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 CCL15-CCL14A0A0B4J2E2 113 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 CLDN25C9JDP6 229 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 LRCH4O75427 683 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 SEC24DO94855 1032 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 KRT19P08727 400 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 PRKCHP24723 683 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 FKBP1BP68106 108 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 MRPS5P82675 430 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 CBLBQ13191 982 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 ZNF846Q147U1 533 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 CARTPTQ16568 116 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 CCL15Q16663 113 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 INAVAQ3KP66 663 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 CASC4Q6P4E1 433 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 GPR142Q7Z601 462 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 WDR83Q9BRX9 315 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 NOL6Q9H6R4 1146 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 TAF4O00268 1085 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 TNPO2O14787 897 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 MTRF1O75570 445 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 TRUB2O95900 331 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 APRTP07741 180 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 PRKCAP17252 672 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 ATICP31939 592 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 IDH3AP50213 366 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 PRKAA2P54646 552 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 PHC1P78364 1004 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 TAZQ16635 292 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 SMTNL2Q2TAL5 461 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 CEP78Q5JTW2 689 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 CYP4A22Q5TCH4 519 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 BNC2Q6ZN30 1099 aaPredicted RBP13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 ANKRD13BQ86YJ7 626 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 DCP2Q8IU60 420 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 SNX29P2Q8IUI4 249 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 UNC45BQ8IWX7 931 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 AFG1LQ8WV93 481 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 ZNF668Q96K58 619 aaPredicted RBP13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 KLHL32Q96NJ5 620 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 PDZD7Q9H5P4 517 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 NANOGQ9H9S0 305 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 FKBP14Q9NWM8 211 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 DNAJC28Q9NX36 388 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 TRIM64BA6NI03 449 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 APOA4P06727 396 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 SMPD1P17405 629 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 TPSB2P20231 275 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 OPRL1P41146 370 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 TPSAB1Q15661 275 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 CRY1Q16526 586 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 OR6B2Q6IFH4 312 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 CYS1Q717R9 158 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 PDZD4Q76G19 769 aaPredicted RBP13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 TMEM130Q8N3G9 435 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 ZNF778Q96MU6 729 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 SLC29A1Q99808 456 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 TRPV6Q9H1D0 765 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 TRIT1Q9H3H1 467 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 RMND5AQ9H871 391 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 SLC27A5Q9Y2P5 690 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 BCLAF3A2AJT9 711 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 TMEM63AO94886 807 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 KCNH1O95259 989 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 HMGCRP04035 888 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 MIPP30301 263 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 SDC4P31431 198 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 NR2C2P49116 596 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 MLLT10P55197 1068 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 SLC25A11Q02978 314 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 ZNF252P-AS1Q0IIN9 211 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 TWF2Q6IBS0 349 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 COQ7Q99807 217 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 PRMT7Q9NVM4 692 aaPredicted RBP13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 TMEM9Q9P0T7 183 aa13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 NXF1Q9UBU9 619 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-204ENST00000449372 HTRA2O43464 458 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms