RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 PAGE1O75459 146 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 LDLRP01130 860 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 PIGRP01833 764 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 KRT6AP02538 564 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 KRT6BP04259 564 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 SNRPB2P08579 225 aaKnown RBP7.22□□□□□ -1.25
BEST1-202ENST00000449131 FCGR1AP12314 374 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 ATP5C1P36542 298 aaKnown RBP7.22□□□□□ -1.25
BEST1-202ENST00000449131 PTPN9P43378 593 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 KRT6CP48668 564 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 RABGGTBP53611 331 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 EPHB3P54753 998 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 OGDHQ02218 1023 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 POTEHQ6S545 545 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 LPCAT2Q7L5N7 544 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 STK32CQ86UX6 486 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 FAM228AQ86W67 206 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 GPSM1Q86YR5 675 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 HERC6Q8IVU3 1022 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.22□□□□□ -1.25
BEST1-202ENST00000449131 ZNF567Q8N184 647 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 BANPQ8N9N5 519 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 STAG3L4Q8TBR4 150 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 MCRS1Q96EZ8 462 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 QKIQ96PU8 341 aaKnown RBP eCLIP7.22□□□□□ -1.25
BEST1-202ENST00000449131 EBF4Q9BQW3 602 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 CDH19Q9H159 772 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 RMND5AQ9H871 391 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 MINDY3Q9H8M7 445 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 GLOD4Q9HC38 313 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 COPG2Q9UBF2 871 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 COL1A2P08123 1366 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 TBX10O75333 385 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 SEC22BO75396 215 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 METTL18O95568 372 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 HOXB8P17481 243 aaPredicted RBP7.22□□□□□ -1.25
BEST1-202ENST00000449131 PBLDP30039 288 aaPredicted RBP7.22□□□□□ -1.25
BEST1-202ENST00000449131 RPL9P32969 192 aaKnown RBP7.22□□□□□ -1.25
BEST1-202ENST00000449131 GRIA3P42263 894 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 IL2P60568 153 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 PTPRNQ16849 979 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 IL27RAQ6UWB1 636 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 C11orf96Q7Z7L8 435 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 TMEM130Q8N3G9 435 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 RAB42Q8N4Z0 105 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 FAM156AQ8NDB6 213 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 CMASQ8NFW8 434 aaPredicted RBP7.22□□□□□ -1.25
BEST1-202ENST00000449131 RP9Q8TA86 221 aaKnown RBP7.22□□□□□ -1.25
BEST1-202ENST00000449131 WDR60Q8WVS4 1066 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 SH3GL1Q99961 368 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 CIPCQ9C0C6 399 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 STN1Q9H668 368 aaKnown RBP7.22□□□□□ -1.25
BEST1-202ENST00000449131 HPS4Q9NQG7 708 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 ARHGEF3Q9NR81 526 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 UXTQ9UBK9 157 aaPredicted RBP7.22□□□□□ -1.25
BEST1-202ENST00000449131 LIMD1Q9UGP4 676 aa7.22□□□□□ -1.25
BEST1-202ENST00000449131 BTBD19C9JJ37 291 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 C22orf31O95567 290 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 APOA1P02647 267 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 NUP107P57740 925 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 LILRA4P59901 499 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 MAP3K10Q02779 954 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 KLF10Q13118 480 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 HIST2H2ACQ16777 129 aaPredicted RBP7.21□□□□□ -1.25
BEST1-202ENST00000449131 MSS51Q4VC12 460 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 HIST2H2AA3Q6FI13 130 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 PRMT9Q6P2P2 845 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 AMIGO2Q86SJ2 522 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 DLG3Q92796 817 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 AZIN2Q96A70 460 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 C7orf26Q96N11 449 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 TRAPPC9Q96Q05 1148 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 ASB2Q96Q27 587 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 BDH2Q9BUT1 245 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 ZNF358Q9NW07 568 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 IMPAD1Q9NX62 359 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 RCOR3Q9P2K3 495 aaPredicted RBP7.21□□□□□ -1.25
BEST1-202ENST00000449131 ZNF180Q9UJW8 692 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 CORO1CQ9ULV4 474 aaPredicted RBP7.21□□□□□ -1.25
BEST1-202ENST00000449131 GLI3P10071 1580 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 PLCH1Q4KWH8 1693 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 GNG14A0A1W2PPG7 69 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 TTLL13PA6NNM8 815 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 C9JVG2 144 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 HNRNPRO43390 633 aaKnown RBP7.21□□□□□ -1.25
BEST1-202ENST00000449131 PLIN3O60664 434 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 PQBP1O60828 265 aaKnown RBP7.21□□□□□ -1.25
BEST1-202ENST00000449131 GCATO75600 419 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 ARIH2O95376 493 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 TGDSO95455 350 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 OR4Q2P0C623 313 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 CSH1P0DML2 217 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 CSH2P0DML3 217 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 GMPRP36959 345 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 GRIA1P42261 906 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 NEK3P51956 506 aa7.21□□□□□ -1.25
BEST1-202ENST00000449131 BOP1Q14137 746 aaKnown RBP7.21□□□□□ -1.25
BEST1-202ENST00000449131 CCDC85BQ15834 202 aaPredicted RBP7.21□□□□□ -1.25
BEST1-202ENST00000449131 FAM98BQ52LJ0 330 aaKnown RBP7.21□□□□□ -1.25
BEST1-202ENST00000449131 STXBP5Q5T5C0 1151 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms