RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TADA1Q96BN2 335 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 MFSD3Q96ES6 412 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 FCRL3Q96P31 734 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 KLHL5Q96PQ7 755 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 RBBP8Q99708 897 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 IL21Q9HBE4 155 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 PDFQ9HBH1 243 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 TRPC7Q9HCX4 862 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 ATP13A1Q9HD20 1204 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 GKN1Q9NS71 199 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 UBA2Q9UBT2 640 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 DCDC2Q9UHG0 476 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 GRID1Q9ULK0 1009 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 TBC1D30Q9Y2I9 924 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 STARD13Q9Y3M8 1113 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 USP15Q9Y4E8 981 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 PCDHB9Q9Y5E1 797 aa10.7□□□□□ -0.7
VIPAS39-203ENST00000448935 H3BNC9 293 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 TLL1O43897 1013 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 UGT1A9O60656 530 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 PAPSS2O95340 614 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 GLUD1P00367 558 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 EPOP01588 193 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 C8AP07357 584 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 SERPINF2P08697 491 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 LINC00271P0C7V0 271 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 IRF1P10914 325 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 HLA-DPA1P20036 260 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 GABRR2P28476 465 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 FOXN2P32314 431 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 CD86P42081 329 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 ETV4P43268 484 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 POLD2P49005 469 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 SERPINH1P50454 418 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 LIMK2P53671 638 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 PCSK7Q16549 785 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 EML3Q32P44 896 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 TMEM240Q5SV17 173 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 TEDDM1Q5T9Z0 273 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 FYB2Q5VWT5 728 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 ALG1LQ6GMV1 187 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 C6orf89Q6UWU4 347 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 CES3Q6UWW8 571 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 KYAT3Q6YP21 454 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 SPATA21Q7Z572 469 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 STRA8Q7Z7C7 330 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 TMEM150AQ86TG1 271 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 UNC5BQ8IZJ1 945 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 PHTF2Q8N3S3 785 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 KREMEN2Q8NCW0 462 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 RAB3IL1Q8TBN0 382 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 CALML6Q8TD86 181 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 HERVK_113Q902F9 699 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 ZNF75CPQ92670 426 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 IFT43Q96FT9 208 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 ZNF419Q96HQ0 510 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 FEM1CQ96JP0 617 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 PRICKLE1Q96MT3 831 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 FAM111AQ96PZ2 611 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 FAM167BQ9BTA0 163 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 CINPQ9BW66 212 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 UGT1A7Q9HAW7 530 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 UGT1A10Q9HAW8 530 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 UGT1A8Q9HAW9 530 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 ZNF334Q9HCZ1 680 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 PLLPQ9Y342 182 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 MTCL1Q9Y4B5 1905 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 TRAV19A0A0A6YYK7 116 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 KLF11O14901 512 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 EDF1O60869 148 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 MPOP05164 745 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 FGF1P05230 155 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 GSTA1P08263 222 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 NMBRP28336 390 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 HOXD9P28356 352 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 TYK2P29597 1187 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 CTNNB1P35222 781 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 BMPR1AP36894 532 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 SERPINB8P50452 374 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 MAXP61244 160 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 RPS24P62847 133 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 SLC7A9P82251 487 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 DSC2Q02487 901 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 THOC5Q13769 683 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 POU6F1Q14863 301 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 MAP7D1Q3KQU3 841 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 HSP90AA5PQ58FG0 334 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 KIAA0930Q6ICG6 404 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 CCDC121Q6ZUS5 278 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 LCA5Q86VQ0 697 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 CNTN4Q8IWV2 1026 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 LMNTD2Q8IXW0 634 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 OTUD6BQ8N6M0 293 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 ARL14EPQ8N8R7 260 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 ARRDC2Q8TBH0 407 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 PEX13Q92968 403 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 ISL2Q96A47 359 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 MYEOVQ96EZ4 313 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 PSKH2Q96QS6 385 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms