RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SRLQ86TD4 932 aa14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 SYT12Q8IV01 421 aa14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 SLC41A1Q8IVJ1 513 aa14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 CCDC13Q8IYE1 715 aa14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 TBC1D3Q8IZP1 549 aaPredicted RBP14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 GPR161Q8N6U8 529 aaKnown RBP14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 TSEN2Q8NCE0 465 aaKnown RBP14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 P3H4Q92791 437 aa14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 ARRDC3Q96B67 414 aa14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 HDAC11Q96DB2 347 aa14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 TSGA13Q96PP4 275 aa14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 PSKH2Q96QS6 385 aa14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 HDAC8Q9BY41 377 aa14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 KDM4CQ9H3R0 1056 aa14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 C6orf106Q9H6K1 298 aaPredicted RBP14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 VPS45Q9NRW7 570 aa14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 CAPN6Q9Y6Q1 641 aa14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 PTPRZ1P23471 2315 aaPredicted RBP14.21□□□□□ -0.13
GTF3C3-206ENST00000448539 SPTBN4Q9H254 2564 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 hCG_1818297A0A087WSY0 165 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 PLRG1O43660 514 aaKnown RBP14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 LRP3O75074 770 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 GNSP15586 552 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 TGM2P21980 687 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 XPAP23025 273 aaPredicted RBP14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 ITPKAP23677 461 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 NR2C2P49116 596 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 SCNN1BP51168 640 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 ITKQ08881 620 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 AP1B1Q10567 949 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 SLC10A2Q12908 348 aaPredicted RBP14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 HNRNPDQ14103 355 aaKnown RBP14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 TAZQ16635 292 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 AGBL4Q5VU57 503 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 KIAA0895LQ68EN5 471 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 NPNTQ6UXI9 565 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 RABEPKQ7Z6M1 372 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 PDLIM2Q96JY6 352 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 KLHL32Q96NJ5 620 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 TUBGCP5Q96RT8 1024 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 HEMGNQ9BXL5 484 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 CPEB1Q9BZB8 566 aaKnown RBP14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 BRD8Q9H0E9 1235 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 MIR1-1HGQ9H1L0 117 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 ATP13A3Q9H7F0 1226 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 SCUBE2Q9NQ36 999 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 SUSD2Q9UGT4 822 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 TPX2Q9ULW0 747 aaKnown RBP14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 PACSIN2Q9UNF0 486 aaPredicted RBP14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 TTLL3Q9Y4R7 772 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 GVINP1Q7Z2Y8 2422 aa14.2□□□□□ -0.14
GTF3C3-206ENST00000448539 ATXN2Q99700 1313 aaKnown RBP14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 C16orf96A6NNT2 1141 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 NEMP1O14524 444 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 INSIG1O15503 277 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 ZSCAN12O43309 604 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 PIGNO95427 931 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 PEX11BO96011 259 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 ADRB3P13945 408 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 CCNB1P14635 433 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 SERPINA4P29622 427 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 HOXD12P35452 270 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 PEX5P50542 639 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 AP1S1P61966 158 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 BCL2L1Q07817 233 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 PPIDQ08752 370 aaKnown RBP14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 CCDC6Q16204 474 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 PIP5KL1Q5T9C9 394 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 C12orf50Q8NA57 414 aaPredicted RBP14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 CEP76Q8TAP6 659 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 MAML1Q92585 1016 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 FATE1Q969F0 183 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 RAB7BQ96AH8 199 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 ZNF641Q96N77 438 aaPredicted RBP14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 LGMNQ99538 433 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 OSBPL8Q9BZF1 889 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 PREBQ9HCU5 417 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 NT5MQ9NPB1 228 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 SEMA4GQ9NTN9 838 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 RBM22Q9NW64 420 aaKnown RBP eCLIP14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 PILRBQ9UKJ0 227 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 EFR3BQ9Y2G0 817 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 PLXND1Q9Y4D7 1925 aa14.19□□□□□ -0.14
GTF3C3-206ENST00000448539 NYNRINQ9P2P1 1898 aaKnown RBP14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 ABCA7Q8IZY2 2146 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 THADAQ6YHU6 1953 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 RNF103O00237 685 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 KHNYNO15037 678 aaKnown RBP14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 FOXD2O60548 495 aaPredicted RBP14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 TJP3O95049 919 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 PCDH8O95206 1070 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 MAOBP27338 520 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 PTPN7P35236 360 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 RGRP47804 291 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 CCR5P51681 352 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 MAXP61244 160 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 CCDC173Q0VFZ6 552 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 CSRP2Q16527 193 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms