RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 GRXCR2A6NFK2 248 aa25.18■■□□□ 1.62
RFFL-206ENST00000447669 BNIP3LO60238 219 aa25.18■■□□□ 1.62
RFFL-206ENST00000447669 ZNF821O75541 412 aaPredicted RBP25.18■■□□□ 1.62
RFFL-206ENST00000447669 FCHO2Q0JRZ9 810 aa25.18■■□□□ 1.62
RFFL-206ENST00000447669 INO80DQ53TQ3 878 aaPredicted RBP25.18■■□□□ 1.62
RFFL-206ENST00000447669 ALG1LQ6GMV1 187 aa25.18■■□□□ 1.62
RFFL-206ENST00000447669 TTC25Q96NG3 672 aa25.18■■□□□ 1.62
RFFL-206ENST00000447669 SMIM14Q96QK8 99 aa25.18■■□□□ 1.62
RFFL-206ENST00000447669 CTNNAL1Q9UBT7 734 aa25.18■■□□□ 1.62
RFFL-206ENST00000447669 PRKCGP05129 697 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 CDH17Q12864 832 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 POU6F1Q14863 301 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 MBLAC2Q68D91 279 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 LRIG3Q6UXM1 1119 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 STAMBPL1Q96FJ0 436 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 ZNF778Q96MU6 729 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 CHRAC1Q9NRG0 131 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 FBXO10Q9UK96 956 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 CHKBQ9Y259 395 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 COL4A3Q01955 1670 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 PSMD3O43242 534 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 HOXC11O43248 304 aaPredicted RBP25.17■■□□□ 1.62
RFFL-206ENST00000447669 NFATC1O95644 943 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 SRCP12931 536 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 PSMC3P17980 439 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 GDI1P31150 447 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 DGKGP49619 791 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 GALNT3Q14435 633 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 SKIV2LQ15477 1246 aaKnown RBP25.17■■□□□ 1.62
RFFL-206ENST00000447669 KRT71Q3SY84 523 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 TRMT10BQ6PF06 316 aaKnown RBP25.17■■□□□ 1.62
RFFL-206ENST00000447669 SUSD6Q92537 303 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 XPO6Q96QU8 1125 aaKnown RBP25.17■■□□□ 1.62
RFFL-206ENST00000447669 RABGEF1Q9UJ41 708 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 NUMBLQ9Y6R0 609 aa25.17■■□□□ 1.62
RFFL-206ENST00000447669 FOXO6A8MYZ6 492 aa25.16■■□□□ 1.62
RFFL-206ENST00000447669 SERPINF2P08697 491 aa25.16■■□□□ 1.62
RFFL-206ENST00000447669 KDSRQ06136 332 aa25.16■■□□□ 1.62
RFFL-206ENST00000447669 SLC12A1Q13621 1099 aa25.16■■□□□ 1.62
RFFL-206ENST00000447669 TTMPQ5BVD1 217 aa25.16■■□□□ 1.62
RFFL-206ENST00000447669 KCTD16Q68DU8 428 aa25.16■■□□□ 1.62
RFFL-206ENST00000447669 LINC00523Q86TU6 105 aa25.16■■□□□ 1.62
RFFL-206ENST00000447669 ETFBKMTQ8IXQ9 262 aa25.16■■□□□ 1.62
RFFL-206ENST00000447669 YAF2Q8IY57 180 aa25.16■■□□□ 1.62
RFFL-206ENST00000447669 SH3GL2Q99962 352 aa25.16■■□□□ 1.62
RFFL-206ENST00000447669 ACBD3Q9H3P7 528 aa25.16■■□□□ 1.62
RFFL-206ENST00000447669 BFARQ9NZS9 450 aa25.16■■□□□ 1.62
RFFL-206ENST00000447669 A0A087WUV0 522 aaPredicted RBP25.15■■□□□ 1.62
RFFL-206ENST00000447669 TCRBV9S1A1TA0A576 114 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 PDHA1P08559 390 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 ECT2LQ008S8 904 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 CBLBQ13191 982 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 PTPRRQ15256 657 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 SLC1A5Q15758 541 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 ACCSLQ4AC99 568 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 SIRPB2Q5JXA9 342 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 NXPE3Q969Y0 559 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 ELSPBP1Q96BH3 223 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 FCRL3Q96P31 734 aaPredicted RBP25.15■■□□□ 1.62
RFFL-206ENST00000447669 NUDCD1Q96RS6 583 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 CIPCQ9C0C6 399 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 VPS45Q9NRW7 570 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 BCCIPQ9P287 314 aaKnown RBP eCLIP25.15■■□□□ 1.62
RFFL-206ENST00000447669 EVLQ9UI08 416 aaPredicted RBP25.15■■□□□ 1.62
RFFL-206ENST00000447669 COL6A3P12111 3177 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 POC1B-GALNT4F8VUJ3 575 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 ATXN1LP0C7T5 689 aaKnown RBP25.15■■□□□ 1.62
RFFL-206ENST00000447669 PIRTP0C851 137 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 RUNX3Q13761 415 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 KIAA0907Q7Z7F0 614 aaPredicted RBP25.15■■□□□ 1.62
RFFL-206ENST00000447669 LRRC39Q96DD0 335 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 CHFRQ96EP1 664 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 CDX2Q99626 313 aaPredicted RBP25.15■■□□□ 1.62
RFFL-206ENST00000447669 MTG2Q9H4K7 406 aa25.15■■□□□ 1.62
RFFL-206ENST00000447669 PRRT4C9JH25 899 aa25.14■■□□□ 1.62
RFFL-206ENST00000447669 GCAP28676 217 aa25.14■■□□□ 1.62
RFFL-206ENST00000447669 PPARDQ03181 441 aa25.14■■□□□ 1.62
RFFL-206ENST00000447669 CDK18Q07002 472 aa25.14■■□□□ 1.62
RFFL-206ENST00000447669 PDCD6IPQ8WUM4 868 aaKnown RBP25.14■■□□□ 1.62
RFFL-206ENST00000447669 MFSD3Q96ES6 412 aa25.14■■□□□ 1.62
RFFL-206ENST00000447669 LOC285095A0A1B0GVY8 99 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 ABHD2P08910 425 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 POLR2EP19388 210 aaKnown RBP25.13■■□□□ 1.61
RFFL-206ENST00000447669 SOX9P48436 509 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 PDGFRLQ15198 375 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 NCEH1Q6PIU2 408 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 AHI1Q8N157 1196 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 SH2D3CQ8N5H7 860 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 ZNF366Q8N895 744 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 IFT43Q96FT9 208 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 SLC2A11Q9BYW1 496 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 SMYD2Q9NRG4 433 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 SLC17A6Q9P2U8 582 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 TBK1Q9UHD2 729 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 PIGNO95427 931 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 F7P08709 466 aaPredicted RBP25.13■■□□□ 1.61
RFFL-206ENST00000447669 TRAF2Q12933 501 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 DLG2Q15700 870 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 TMBIM4Q9HC24 238 aa25.13■■□□□ 1.61
RFFL-206ENST00000447669 ZDHHC4Q9NPG8 344 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms