RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 ADRA1DP25100 572 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 FASP25445 335 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 NDUFA9Q16795 377 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 AP5B1Q2VPB7 878 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 TAGLN3Q9UI15 199 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 TPST1O60507 370 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 EPORP19235 508 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 PTPN9P43378 593 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 TBC1D25Q3MII6 688 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 NACC2Q96BF6 587 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 TBCDQ9BTW9 1192 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 LZTS1Q9Y250 596 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 CAPN6Q9Y6Q1 641 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 ATG13O75143 517 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 HTR7P34969 479 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 IGFALSP35858 605 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 OVGP1Q12889 678 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 C15orf59Q2T9L4 293 aaPredicted RBP11.32□□□□□ -0.6
FN1-211ENST00000443816 GPAT3Q53EU6 434 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 FAAH2Q6GMR7 532 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 FUT10Q6P4F1 479 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 OR52L1Q8NGH7 329 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 RNPEPQ9H4A4 650 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 TMPRSS4Q9NRS4 437 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 RNF19AQ9NV58 838 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 SLC28A1O00337 649 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 PSMD8P48556 350 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 TYW3Q6IPR3 259 aaKnown RBP11.32□□□□□ -0.6
FN1-211ENST00000443816 APOPT1Q96IL0 206 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 CICQ96RK0 1608 aaPredicted RBP11.32□□□□□ -0.6
FN1-211ENST00000443816 RNASEH2AO75792 299 aaKnown RBP11.32□□□□□ -0.6
FN1-211ENST00000443816 PRNPP04156 253 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 ITGAVP06756 1048 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 CPA2P48052 419 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 NEK3P51956 506 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 SNAP47Q5SQN1 464 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 TXNDC11Q6PKC3 985 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 ZNF786Q8N393 782 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 UTP15Q8TED0 518 aaKnown RBP11.32□□□□□ -0.6
FN1-211ENST00000443816 HNRNPLLQ8WVV9 542 aaKnown RBP11.32□□□□□ -0.6
FN1-211ENST00000443816 CATSPER2Q96P56 530 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 PURBQ96QR8 312 aaKnown RBP11.32□□□□□ -0.6
FN1-211ENST00000443816 GPR20Q99678 358 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 CROCCQ5TZA2 2017 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 C1RP00736 705 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 LTA4HP09960 611 aaKnown RBP11.32□□□□□ -0.6
FN1-211ENST00000443816 RBL1P28749 1068 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 CORO1AP31146 461 aaKnown RBP11.32□□□□□ -0.6
FN1-211ENST00000443816 USP4Q13107 963 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 KPNB1Q14974 876 aaKnown RBP11.32□□□□□ -0.6
FN1-211ENST00000443816 SF1Q15637 639 aaKnown RBP11.32□□□□□ -0.6
FN1-211ENST00000443816 XKR6Q5GH73 641 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 WDR59Q6PJI9 974 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 IFNL1Q8IU54 200 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 FAM71AQ8IYT1 594 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 ARHGAP20Q9P2F6 1191 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 ASF1AQ9Y294 204 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 KCNE2Q9Y6J6 123 aa11.32□□□□□ -0.6
FN1-211ENST00000443816 WWP2O00308 870 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 NFKB1P19838 968 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 KCNA3P22001 575 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 LSM12Q3MHD2 195 aaKnown RBP11.31□□□□□ -0.6
FN1-211ENST00000443816 ABHD15Q6UXT9 468 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 DENND6AQ8IWF6 608 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 ZCCHC9Q8N567 271 aaKnown RBP11.31□□□□□ -0.6
FN1-211ENST00000443816 IL25Q9H293 177 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 DOT1LQ8TEK3 1739 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 SAC3D1A6NKF1 404 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 RASGRP1O95267 797 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 E2F4Q16254 413 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 FAM35AQ86V20 835 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 MDM1Q8TC05 714 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 METTL21AQ8WXB1 218 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 SLC4A5Q9BY07 1137 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.31□□□□□ -0.6
FN1-211ENST00000443816 GALNT8Q9NY28 637 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 GULP1Q9UBP9 304 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 AGRPO00253 132 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 B4GALT4O60513 344 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 FGRP09769 529 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 VHLP40337 213 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 HNMTP50135 292 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 RAB30Q15771 203 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 WDR93Q6P2C0 686 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 CHSY3Q70JA7 882 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 HDDC3Q8N4P3 179 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 C12orf29Q8N999 325 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 NOA1Q8NC60 698 aaKnown RBP11.31□□□□□ -0.6
FN1-211ENST00000443816 OR14C36Q8NHC7 312 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 TMEM120AQ9BXJ8 343 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 KLQ9UEF7 1012 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 SLC45A1Q9Y2W3 748 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 KCNMA1Q12791 1236 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 NEK5Q6P3R8 708 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 CES3Q6UWW8 571 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 LRRC74BQ6ZQY2 392 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 VPS4AQ9UN37 437 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 CCDC166P0CW27 439 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 BLKP51451 505 aa11.31□□□□□ -0.6
FN1-211ENST00000443816 HYIQ5T013 277 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms