RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 HLA-FP30511 346 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 FOXN2P32314 431 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 NUDT1P36639 197 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SERPINB5P36952 375 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 HPCAL1P37235 193 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PRKAA2P54646 552 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 BACE1P56817 501 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 RAB14P61106 215 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ATP6V0D1P61421 351 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ERVK-8P63133 956 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 CYP4F2P78329 520 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ALDH6A1Q02252 535 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 CYP4F3Q08477 520 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SSRP1Q08945 709 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 DMWDQ09019 674 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 USP17L24Q0WX57 530 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 EFR3AQ14156 821 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ADGRE1Q14246 886 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 UBXN2BQ14CS0 331 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 LRRC41Q15345 812 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TYSND1Q2T9J0 566 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZBED5Q49AG3 693 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 FGD3Q5JSP0 725 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 IQSEC1Q6DN90 963 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PYHIN1Q6K0P9 492 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 KIAA1841Q6NSI8 718 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 VSTM1Q6UX27 236 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PIK3AP1Q6ZUJ8 805 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TMEM26Q6ZUK4 368 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 OTOAQ7RTW8 1153 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 APTXQ7Z2E3 356 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 TMPRSS9Q7Z410 1059 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 HAUS6Q7Z4H7 955 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 METTL23Q86XA0 190 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 CPA6Q8N4T0 437 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TBC1D15Q8TC07 691 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 EPS8L1Q8TE68 723 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 C10orf82Q8WW14 230 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 S100ZQ8WXG8 99 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 AUTS2Q8WXX7 1259 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 REXO5Q96IC2 774 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 ALPK1Q96QP1 1244 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 KCNK16Q96T55 309 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SERPINI1Q99574 410 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 C12orf57Q99622 126 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 EFHD1Q9BUP0 239 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 BBS2Q9BXC9 721 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 NUSAP1Q9BXS6 441 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 EDEM3Q9BZQ6 932 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 WWP1Q9H0M0 922 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 KCNN2Q9H2S1 579 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 COPS7BQ9H9Q2 264 aaPredicted RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 PNPLA3Q9NST1 481 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 FLRT1Q9NZU1 646 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TRPS1Q9UHF7 1281 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ADGRE2Q9UHX3 823 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 STOML2Q9UJZ1 356 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 GRID1Q9ULK0 1009 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SNX7Q9UNH6 387 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PLAGL2Q9UPG8 496 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PLCL2Q9UPR0 1127 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 MAN2B2Q9Y2E5 1009 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 DGKBQ9Y6T7 804 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZFHX4Q86UP3 3567 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 LY75O60449 1722 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ABCB11O95342 1321 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 CELSR3Q9NYQ7 3312 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZNF831Q5JPB2 1677 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 FAM208AQ9UK61 1670 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 LCHNA4D1U4 455 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZNF98A6NK75 572 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SLC9A3R1O14745 358 aaPredicted RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZNF263O14978 683 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SEPT4O43236 478 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SCO2O43819 266 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 DNAJA2O60884 412 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 RNGTTO60942 597 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 CLPXO76031 633 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 RPN1P04843 607 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 AKR1B1P15121 316 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 DDCP20711 480 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 IL10P22301 178 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ECHS1P30084 290 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 MTHFRP42898 656 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PCP4P48539 62 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ADCY7P51828 1080 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZNF280AP59817 542 aaPredicted RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 S100A12P80511 92 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 SLC25A3Q00325 362 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 IFITM2Q01629 132 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZNF211Q13398 564 aaPredicted RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 SNTA1Q13424 505 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 NAB1Q13506 487 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 LAPTM5Q13571 262 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 POU6F1Q14863 301 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 OXA1LQ15070 435 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PTPAQ15257 358 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PLEKHG6Q3KR16 790 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TBRG1Q3YBR2 411 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 MCMDC2Q4G0Z9 681 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms