RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 ZNF883P0CG24 379 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 NUDT1P36639 197 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 ABL2P42684 1182 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 CDH6P55285 790 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 SIM1P81133 766 aaPredicted RBP13.93□□□□□ -0.18
LTBR-202ENST00000440421 RAD51Q06609 339 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 MMRN1Q13201 1228 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 TBX2Q13207 712 aaPredicted RBP13.93□□□□□ -0.18
LTBR-202ENST00000440421 STAT4Q14765 748 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 HADHQ16836 314 aaKnown RBP13.93□□□□□ -0.18
LTBR-202ENST00000440421 ZNF284Q2VY69 593 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 LRRC73Q5JTD7 316 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 TMCO3Q6UWJ1 677 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 OSBPL1AQ9BXW6 950 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 FZD3Q9NPG1 666 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 ETNK2Q9NVF9 386 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 KLHL11Q9NVR0 708 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 UVRAGQ9P2Y5 699 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 GGT7Q9UJ14 662 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 ITM2BQ9Y287 266 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 PCDHB9Q9Y5E1 797 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 FADS3Q9Y5Q0 445 aa13.93□□□□□ -0.18
LTBR-202ENST00000440421 NCOR2Q9Y618 2525 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 NEMP1O14524 444 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 PALMO75781 387 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 PROSCO94903 275 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 PIGNO95427 931 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 CD48P09326 243 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 TMEM253P0C7T8 217 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 CCT8P50990 548 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 NXPH1P58417 271 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 TAS2R40P59535 323 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 FOXC1Q12948 553 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 ZNF423Q2M1K9 1284 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 ATP13A4Q4VNC1 1196 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 LZTR1Q8N653 840 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 MFSD2AQ8NA29 543 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 TSEN2Q8NCE0 465 aaKnown RBP13.92□□□□□ -0.18
LTBR-202ENST00000440421 FEM1CQ96JP0 617 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 GDF3Q9NR23 364 aa13.92□□□□□ -0.18
LTBR-202ENST00000440421 IPO11Q9UI26 975 aaKnown RBP13.92□□□□□ -0.18
LTBR-202ENST00000440421 A0A1B0GTQ1 180 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 AP1G1O43747 822 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 HNRNPA2B1P22626 353 aaKnown RBP13.91□□□□□ -0.18
LTBR-202ENST00000440421 PMLP29590 882 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 AKT2P31751 481 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 RGRP47804 291 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 CLDN2P57739 230 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 RPS21P63220 83 aaKnown RBP13.91□□□□□ -0.18
LTBR-202ENST00000440421 IL10RBQ08334 325 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 MESDQ14696 234 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 SUZ12Q15022 739 aaKnown RBP13.91□□□□□ -0.18
LTBR-202ENST00000440421 TRIP6Q15654 476 aaKnown RBP13.91□□□□□ -0.18
LTBR-202ENST00000440421 TMEM259Q4ZIN3 620 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 ZFYVE27Q5T4F4 411 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 KIAA1161Q6NSJ0 714 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 TTC7BQ86TV6 843 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 SPATS2Q86XZ4 545 aaKnown RBP13.91□□□□□ -0.18
LTBR-202ENST00000440421 GATAD2AQ86YP4 633 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 SLC35G2Q8TBE7 412 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 RHBDD1Q8TEB9 315 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 TSC1Q92574 1164 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 RAB7BQ96AH8 199 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 ELF4Q99607 663 aaPredicted RBP13.91□□□□□ -0.18
LTBR-202ENST00000440421 CINPQ9BW66 212 aaPredicted RBP13.91□□□□□ -0.18
LTBR-202ENST00000440421 CALN1Q9BXU9 219 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 PCOLCE2Q9UKZ9 415 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 BTBD3Q9Y2F9 522 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 PCDHGB2Q9Y5G2 931 aa13.91□□□□□ -0.18
LTBR-202ENST00000440421 IGLON5A6NGN9 336 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 FLRT2O43155 660 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 SPINT1O43278 529 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 TSPAN6O43657 245 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 DFNA5O60443 496 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 TOP3BO95985 862 aaKnown RBP13.9□□□□□ -0.18
LTBR-202ENST00000440421 PAK4O96013 591 aaPredicted RBP13.9□□□□□ -0.18
LTBR-202ENST00000440421 ITIH2P19823 946 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 SPINK2P20155 84 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 XPAP23025 273 aaPredicted RBP13.9□□□□□ -0.18
LTBR-202ENST00000440421 IL4RP24394 825 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 ZNF75DP51815 510 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 SLC10A7Q0GE19 358 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 HNRNPDQ14103 355 aaKnown RBP13.9□□□□□ -0.18
LTBR-202ENST00000440421 FGL2Q14314 439 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 LBRQ14739 615 aaKnown RBP13.9□□□□□ -0.18
LTBR-202ENST00000440421 SRLQ86TD4 932 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 GAS2L3Q86XJ1 694 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 TC2NQ8N9U0 490 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 TMEM145Q8NBT3 493 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 KCTD6Q8NC69 237 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 KLHDC7BQ96G42 594 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 SLC17A9Q9BYT1 436 aa13.9□□□□□ -0.18
LTBR-202ENST00000440421 CPEB1Q9BZB8 566 aaKnown RBP13.9□□□□□ -0.18
LTBR-202ENST00000440421 KNL1Q8NG31 2342 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 MUSKO15146 869 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 RAD51BO15315 384 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 PCDHGA12O60330 932 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 BUB1BO60566 1050 aaPredicted RBP13.89□□□□□ -0.19
LTBR-202ENST00000440421 MAGEC1O60732 1142 aa13.89□□□□□ -0.19
LTBR-202ENST00000440421 CBFA2T3O75081 653 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms