RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 GRK2P25098 689 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 CORO1AP31146 461 aaKnown RBP25.97■■□□□ 1.75
CPNE1-216ENST00000437340 ELF1P32519 619 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 IRX4P78413 519 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 PLD1Q13393 1074 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 SEPT6Q14141 434 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 SLC14A2Q15849 920 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 ASRGL1Q7L266 308 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 C2CD4AQ8NCU7 369 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-216ENST00000437340 DDX50Q9BQ39 737 aaKnown RBP25.97■■□□□ 1.75
CPNE1-216ENST00000437340 SIKE1Q9BRV8 207 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 CXXC1Q9P0U4 656 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-216ENST00000437340 SLC2A6Q9UGQ3 507 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 ZFP69BQ9UJL9 534 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 HGSO14964 777 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-216ENST00000437340 SERPINE1P05121 402 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 HOXD9P28356 352 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-216ENST00000437340 ADGRF1Q5T601 910 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 TSTD2Q5T7W7 516 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 PACS2Q86VP3 889 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 CALML6Q8TD86 181 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 KLHL29Q96CT2 875 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 SAR1AQ9NR31 198 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 STK39Q9UEW8 545 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 SLC39A10Q9ULF5 831 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 ILVBLA1L0T0 632 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 PRRG1O14668 218 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 KLKB1P03952 638 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 GABRB3P28472 473 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 PPM1AP35813 382 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 ETFBP38117 255 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 IHHQ14623 411 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 SETD3Q86TU7 594 aaPredicted RBP25.96■■□□□ 1.75
CPNE1-216ENST00000437340 MTDHQ86UE4 582 aaKnown RBP25.96■■□□□ 1.75
CPNE1-216ENST00000437340 FEM1CQ96JP0 617 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 PRICKLE1Q96MT3 831 aaPredicted RBP25.96■■□□□ 1.75
CPNE1-216ENST00000437340 YME1L1Q96TA2 773 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 SEMA3CQ99985 751 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 CAB39LQ9H9S4 337 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 ARHGEF3Q9NR81 526 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.96■■□□□ 1.75
CPNE1-216ENST00000437340 MID2Q9UJV3 735 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 TLK1Q9UKI8 766 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 CHD5Q8TDI0 1954 aa25.96■■□□□ 1.75
CPNE1-216ENST00000437340 LATS1O95835 1130 aa25.95■■□□□ 1.75
CPNE1-216ENST00000437340 APOA4P06727 396 aa25.95■■□□□ 1.75
CPNE1-216ENST00000437340 MYL2P10916 166 aa25.95■■□□□ 1.75
CPNE1-216ENST00000437340 COL6A2P12110 1019 aa25.95■■□□□ 1.75
CPNE1-216ENST00000437340 CPA3P15088 417 aa25.95■■□□□ 1.75
CPNE1-216ENST00000437340 HLA-DPA1P20036 260 aa25.95■■□□□ 1.75
CPNE1-216ENST00000437340 EPHB3P54753 998 aa25.95■■□□□ 1.75
CPNE1-216ENST00000437340 TWF1Q12792 350 aa25.95■■□□□ 1.75
CPNE1-216ENST00000437340 LAMB3Q13751 1172 aa25.95■■□□□ 1.75
CPNE1-216ENST00000437340 PSRC1Q6PGN9 363 aaPredicted RBP25.95■■□□□ 1.75
CPNE1-216ENST00000437340 PLD6Q8N2A8 252 aaKnown RBP25.95■■□□□ 1.75
CPNE1-216ENST00000437340 HTATIP2Q9BUP3 242 aa25.95■■□□□ 1.75
CPNE1-216ENST00000437340 RNF38Q9H0F5 515 aa25.95■■□□□ 1.75
CPNE1-216ENST00000437340 HEY2Q9UBP5 337 aa25.95■■□□□ 1.75
CPNE1-216ENST00000437340 STOML2Q9UJZ1 356 aa25.95■■□□□ 1.75
CPNE1-216ENST00000437340 A0A0D9SEW6 157 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 A0A1B0GVM2 712 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 TCAF2A6NFQ2 919 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 MROH6A6NGR9 719 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 KDELR3O43731 214 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 ATP5BP06576 529 aaKnown RBP25.95■■□□□ 1.74
CPNE1-216ENST00000437340 ATXN1LP0C7T5 689 aaKnown RBP25.95■■□□□ 1.74
CPNE1-216ENST00000437340 KCNA4P22459 653 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 ABCG1P45844 678 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 RPS24P62847 133 aaKnown RBP25.95■■□□□ 1.74
CPNE1-216ENST00000437340 CREMQ03060 361 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 USP10Q14694 798 aaKnown RBP25.95■■□□□ 1.74
CPNE1-216ENST00000437340 RFTN1Q14699 578 aaPredicted RBP25.95■■□□□ 1.74
CPNE1-216ENST00000437340 DLG2Q15700 870 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 TAF1BQ53T94 588 aaPredicted RBP25.95■■□□□ 1.74
CPNE1-216ENST00000437340 SIRPB2Q5JXA9 342 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 NEPROQ6NW34 567 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 DNAJB7Q7Z6W7 309 aaPredicted RBP25.95■■□□□ 1.74
CPNE1-216ENST00000437340 CLNKQ7Z7G1 428 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 ARID3BQ8IVW6 561 aaPredicted RBP25.95■■□□□ 1.74
CPNE1-216ENST00000437340 DENND6AQ8IWF6 608 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 SKA1Q96BD8 255 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 MGME1Q9BQP7 344 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 TUBB6Q9BUF5 446 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 MRPL17Q9NRX2 175 aaKnown RBP25.95■■□□□ 1.74
CPNE1-216ENST00000437340 GKN1Q9NS71 199 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 SEPT3Q9UH03 358 aa25.95■■□□□ 1.74
CPNE1-216ENST00000437340 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.94■■□□□ 1.74
CPNE1-216ENST00000437340 HNRNPCL1O60812 293 aaKnown RBP25.94■■□□□ 1.74
CPNE1-216ENST00000437340 FGF1P05230 155 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 NQO1P15559 274 aaKnown RBP25.94■■□□□ 1.74
CPNE1-216ENST00000437340 SLC1A2P43004 574 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 CD151P48509 253 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 ZNF177Q13360 481 aaPredicted RBP25.94■■□□□ 1.74
CPNE1-216ENST00000437340 CTBP1Q13363 440 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 SLC12A1Q13621 1099 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 IL31Q6EBC2 164 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 ZCCHC23Q6ZST2 131 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 GALNT7Q86SF2 657 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 HERC6Q8IVU3 1022 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 C10orf107Q8IVU9 208 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms