RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 PCDHB11Q9Y5F2 797 aa14.9□□□□□ -0.02
PDAP1-202ENST00000426447 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.9□□□□□ -0.02
PDAP1-202ENST00000426447 GOLGA6L4A6NEF3 574 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 AGRPO00253 132 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 F9P00740 461 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 RPLP0P05388 317 aaKnown RBP14.89□□□□□ -0.03
PDAP1-202ENST00000426447 LIPCP11150 499 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 ITGB6P18564 788 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 EIF4A3P38919 411 aaKnown RBP14.89□□□□□ -0.03
PDAP1-202ENST00000426447 PPP1R2P41236 205 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 SULT1E1P49888 294 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 BLKP51451 505 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 CCL7P80098 99 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 SRSF6Q13247 344 aaKnown RBP14.89□□□□□ -0.03
PDAP1-202ENST00000426447 ELOCQ15369 112 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 ARHGAP44Q17R89 818 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 ZNF805Q5CZA5 627 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 ACBD5Q5T8D3 534 aaPredicted RBP14.89□□□□□ -0.03
PDAP1-202ENST00000426447 OLFML1Q6UWY5 402 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 ZNF783Q6ZMS7 281 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 TTC7BQ86TV6 843 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 SDR16C5Q8N3Y7 309 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 FSTL5Q8N475 847 aaPredicted RBP14.89□□□□□ -0.03
PDAP1-202ENST00000426447 ARL10Q8N8L6 244 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 OR6K2Q8NGY2 324 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 CCDC74AQ96AQ1 378 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 CENPTQ96BT3 561 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 FAM81BQ96LP2 452 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 C1orf74Q96LT6 269 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 C1QTNF7Q9BXJ2 289 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 CPEB1Q9BZB8 566 aaKnown RBP14.89□□□□□ -0.03
PDAP1-202ENST00000426447 ANLNQ9NQW6 1124 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.89□□□□□ -0.03
PDAP1-202ENST00000426447 GGT7Q9UJ14 662 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 ITM2BQ9Y287 266 aa14.89□□□□□ -0.03
PDAP1-202ENST00000426447 KRIT1O00522 736 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 NVLO15381 856 aaKnown RBP14.88□□□□□ -0.03
PDAP1-202ENST00000426447 MMP20O60882 483 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 PPFIA2O75334 1257 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 TM7SF2O76062 418 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 GNA14O95837 355 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 ERBB2P04626 1255 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 ALPIP09923 528 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 GKP32189 559 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 KRT9P35527 623 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 ABL2P42684 1182 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 GNA12Q03113 381 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 TCEA2Q15560 299 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 GJB7Q6PEY0 223 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 LVRNQ6Q4G3 990 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 SLC26A9Q7LBE3 791 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 RD3Q7Z3Z2 195 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 LURAP1LQ8IV03 231 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 HID1Q8IV36 788 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 TRIM59Q8IWR1 403 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 ZNF683Q8IZ20 524 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 FMR1NBQ8N0W7 255 aaPredicted RBP14.88□□□□□ -0.03
PDAP1-202ENST00000426447 C1orf131Q8NDD1 294 aaKnown RBP14.88□□□□□ -0.03
PDAP1-202ENST00000426447 NPY6RQ99463 290 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 SEMA3CQ99985 751 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 RABGEF1Q9UJ41 708 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 ACSL6Q9UKU0 697 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 PNMA8BQ9ULN7 279 aaPredicted RBP14.88□□□□□ -0.03
PDAP1-202ENST00000426447 GPR34Q9UPC5 381 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 ZDHHC9Q9Y397 364 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 PIEZO2Q9H5I5 2752 aa14.88□□□□□ -0.03
PDAP1-202ENST00000426447 BICDL2A1A5D9 508 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 D6RAR5 112 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 TOR1BO14657 336 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 ZMPSTE24O75844 475 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 CELA2BP08218 269 aaPredicted RBP14.87□□□□□ -0.03
PDAP1-202ENST00000426447 CD44P16070 742 aaKnown RBP14.87□□□□□ -0.03
PDAP1-202ENST00000426447 TFE3P19532 575 aaPredicted RBP14.87□□□□□ -0.03
PDAP1-202ENST00000426447 IGFALSP35858 605 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 ARF5P84085 180 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 PTK2Q05397 1052 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 POLD3Q15054 466 aaPredicted RBP14.87□□□□□ -0.03
PDAP1-202ENST00000426447 TBR1Q16650 682 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 MACC1Q6ZN28 852 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 VASH2Q86V25 355 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 GKN2Q86XP6 184 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 CREBRFQ8IUR6 639 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 DRC7Q8IY82 874 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 Q8N9G6 341 aaPredicted RBP14.87□□□□□ -0.03
PDAP1-202ENST00000426447 KYQ8NBH2 561 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 ZNF397Q8NF99 534 aaPredicted RBP14.87□□□□□ -0.03
PDAP1-202ENST00000426447 OR6C4Q8NGE1 309 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 PCDH19Q8TAB3 1148 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 SPATA20Q8TB22 786 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 CXorf40AQ8TE69 158 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 NELFBQ8WX92 580 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 KLHL32Q96NJ5 620 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 ZYG11BQ9C0D3 744 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 LRRN3Q9H3W5 708 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 TMPRSS4Q9NRS4 437 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 PCDHGC3Q9UN70 934 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 LOXL2Q9Y4K0 774 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 ACTL7AQ9Y615 435 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 TRPM6Q9BX84 2022 aa14.87□□□□□ -0.03
PDAP1-202ENST00000426447 IGLV3-10A0A075B6K4 115 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms