RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 TIMP2P16035 220 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 ITIH2P19823 946 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 AMPD1P23109 780 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 IL4RP24394 825 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 RXRGP48443 463 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 RHOAP61586 193 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 BNIP3Q12983 259 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 SLC45A4Q5BKX6 768 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 GDPD4Q6W3E5 623 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 GATAD2AQ86YP4 633 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 PNPLA1Q8N8W4 532 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 SAP25Q8TEE9 199 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 FEM1CQ96JP0 617 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 BMFQ96LC9 184 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 GDAP1L1Q96MZ0 367 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 CHP1Q99653 195 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 MYOCQ99972 504 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 SCNM1Q9BWG6 230 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 SLC17A9Q9BYT1 436 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 CPEB1Q9BZB8 566 aaKnown RBP18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 CAAP1Q9H8G2 361 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 GDF3Q9NR23 364 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 IP6K2Q9UHH9 426 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 ITM2BQ9Y287 266 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 PCDHB9Q9Y5E1 797 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 ARHGAP42A6NI28 874 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 AREL1O15033 823 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 RAD51BO15315 384 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 HYAL3O43820 417 aaPredicted RBP18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 BUB1BO60566 1050 aaPredicted RBP18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 PAK4O96013 591 aaPredicted RBP18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 FTH1P19P0C7X4 201 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 RGRP47804 291 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 ZNF135P52742 658 aaPredicted RBP18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 CLDN2P57739 230 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 OVGP1Q12889 678 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 SLC18A3Q16572 532 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 GCNT7Q6ZNI0 430 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 KANSL1Q7Z3B3 1105 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 CHCHD4Q8N4Q1 142 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 TSC1Q92574 1164 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 HSPH1Q92598 858 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 EXOC2Q96KP1 924 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 NSMCE3Q96MG7 304 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 CSPG4P5Q96PW8 444 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 C1QTNF2Q9BXJ5 285 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 TMEM121BQ9BXQ6 578 aaPredicted RBP18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 OSBPL1AQ9BXW6 950 aa18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.58■□□□□ 0.56
SMARCAL1-205ENST00000425815 SSU72P8A0A1W2PR75 194 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 IGLON5A6NGN9 336 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 MYO1FO00160 1098 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 DKK1O94907 266 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 IGSF6O95976 241 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 ATXN1LP0C7T5 689 aaKnown RBP18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 HNRNPA2B1P22626 353 aaKnown RBP18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 ARSEP51690 589 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 ADKP55263 362 aaKnown RBP18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 RPS21P63220 83 aaKnown RBP18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 TRIM14Q14142 442 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 ATP13A4Q4VNC1 1196 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 KIAA1161Q6NSJ0 714 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 RAB44Q7Z6P3 723 aaPredicted RBP18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 ABI3BPQ7Z7G0 1075 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 TTC7BQ86TV6 843 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 TSEN2Q8NCE0 465 aaKnown RBP18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 FAM71BQ8TC56 605 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 TEKT4Q8WW24 435 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 RAB7BQ96AH8 199 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 KLHDC7BQ96G42 594 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 KLF6Q99612 283 aaPredicted RBP18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 PCDH18Q9HCL0 1135 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 ABHD10Q9NUJ1 306 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 DKK3Q9UBP4 350 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 HS3ST3A1Q9Y663 406 aa18.57■□□□□ 0.56
SMARCAL1-205ENST00000425815 H3BRJ5 948 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 DFFAO00273 331 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 MUSKO15146 869 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 TSPAN6O43657 245 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 PIGNO95427 931 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 PEX11BO96011 259 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 CD48P09326 243 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 THEGLP0DJG4 465 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 EPHA8P29322 1005 aaPredicted RBP18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 AKT2P31751 481 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 GRK6P43250 576 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 RAD51Q06609 339 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 TBX2Q13207 712 aaPredicted RBP18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 LRRC73Q5JTD7 316 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 OR13H1Q8NG92 308 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 ZNF564Q8TBZ8 553 aaPredicted RBP18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 ADAMTS14Q8WXS8 1223 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 LENG8Q96PV6 779 aaPredicted RBP18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 CDC6Q99741 560 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 IPO11Q9UI26 975 aaKnown RBP18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 KLK13Q9UKR3 277 aa18.56■□□□□ 0.56
SMARCAL1-205ENST00000425815 FAM221BA6H8Z2 402 aa18.55■□□□□ 0.56
SMARCAL1-205ENST00000425815 POM121BA6NF01 834 aa18.55■□□□□ 0.56
SMARCAL1-205ENST00000425815 MFAP3LO75121 409 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms