RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 RECQLP46063 649 aaPredicted RBP16.44■□□□□ 0.22
DDR1-234ENST00000424544 NSFP46459 744 aaKnown RBP16.44■□□□□ 0.22
DDR1-234ENST00000424544 NEK3P51956 506 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 ZNF143P52747 638 aaPredicted RBP16.44■□□□□ 0.22
DDR1-234ENST00000424544 RPS21P63220 83 aaKnown RBP16.44■□□□□ 0.22
DDR1-234ENST00000424544 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
DDR1-234ENST00000424544 CYP4F3Q08477 520 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 GCNT7Q6ZNI0 430 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 VPS36Q86VN1 386 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 SLC22A18ASQ8N1D0 253 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 OR13H1Q8NG92 308 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 GRIN3AQ8TCU5 1115 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 ASB12Q8WXK4 309 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 IFT43Q96FT9 208 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 PPP1R16AQ96I34 528 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 FEM1CQ96JP0 617 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 CCDC42Q96M95 316 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 LENG8Q96PV6 779 aaPredicted RBP16.44■□□□□ 0.22
DDR1-234ENST00000424544 C1QTNF2Q9BXJ5 285 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 SLC17A9Q9BYT1 436 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 NHEJ1Q9H9Q4 299 aaPredicted RBP16.44■□□□□ 0.22
DDR1-234ENST00000424544 DYRK4Q9NR20 520 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 DNAI1Q9UI46 699 aa16.44■□□□□ 0.22
DDR1-234ENST00000424544 C16orf96A6NNT2 1141 aa16.43■□□□□ 0.22
DDR1-234ENST00000424544 WASH4PA8MWX3 477 aa16.43■□□□□ 0.22
DDR1-234ENST00000424544 NRDCO43847 1150 aa16.43■□□□□ 0.22
DDR1-234ENST00000424544 PCDH8O95206 1070 aa16.43■□□□□ 0.22
DDR1-234ENST00000424544 PAK4O96013 591 aaPredicted RBP16.43■□□□□ 0.22
DDR1-234ENST00000424544 GSRP00390 522 aa16.43■□□□□ 0.22
DDR1-234ENST00000424544 CALB1P05937 261 aa16.43■□□□□ 0.22
DDR1-234ENST00000424544 GPD1P21695 349 aa16.43■□□□□ 0.22
DDR1-234ENST00000424544 DGKAP23743 735 aa16.43■□□□□ 0.22
DDR1-234ENST00000424544 RPL7AP62424 266 aaKnown RBP16.43■□□□□ 0.22
DDR1-234ENST00000424544 KIAA1161Q6NSJ0 714 aa16.43■□□□□ 0.22
DDR1-234ENST00000424544 SLFN11Q7Z7L1 901 aa16.43■□□□□ 0.22
DDR1-234ENST00000424544 DCP2Q8IU60 420 aaKnown RBP16.43■□□□□ 0.22
DDR1-234ENST00000424544 CCDC112Q8NEF3 446 aa16.43■□□□□ 0.22
DDR1-234ENST00000424544 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.43■□□□□ 0.22
DDR1-234ENST00000424544 CAAP1Q9H8G2 361 aa16.43■□□□□ 0.22
DDR1-234ENST00000424544 FZD3Q9NPG1 666 aa16.43■□□□□ 0.22
DDR1-234ENST00000424544 LHX6Q9UPM6 363 aa16.43■□□□□ 0.22
DDR1-234ENST00000424544 ATRXP46100 2492 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 POM121BA6NF01 834 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 AREL1O15033 823 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 RAD51BO15315 384 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 SPINT1O43278 529 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 SIGLEC6O43699 453 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 AKR1B10O60218 316 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 RAMP2O60895 175 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 SDC3O75056 442 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 POP4O95707 220 aaKnown RBP16.42■□□□□ 0.22
DDR1-234ENST00000424544 AKT2P31751 481 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 GKP32189 559 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 DNA2P51530 1060 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 GEMIN4P57678 1058 aaKnown RBP16.42■□□□□ 0.22
DDR1-234ENST00000424544 CLDN2P57739 230 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 POLD3Q15054 466 aaPredicted RBP16.42■□□□□ 0.22
DDR1-234ENST00000424544 ASTE1Q2TB18 679 aaPredicted RBP16.42■□□□□ 0.22
DDR1-234ENST00000424544 MYLK3Q32MK0 819 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 INO80DQ53TQ3 878 aaPredicted RBP16.42■□□□□ 0.22
DDR1-234ENST00000424544 ZNF805Q5CZA5 627 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 ACAD10Q6JQN1 1059 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 RWDD4Q6NW29 188 aaKnown RBP16.42■□□□□ 0.22
DDR1-234ENST00000424544 Q6ZSR6 202 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 PARS2Q7L3T8 475 aaKnown RBP16.42■□□□□ 0.22
DDR1-234ENST00000424544 ZSCAN30Q86W11 494 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 TMEM139Q8IV31 216 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 CCDC170Q8IYT3 715 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 PYROXD2Q8N2H3 581 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 RTL3Q8N8U3 475 aaKnown RBP16.42■□□□□ 0.22
DDR1-234ENST00000424544 OR2AP1Q8NGE2 309 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 OR4C6Q8NH72 309 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 RAB7BQ96AH8 199 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 TBC1D31Q96DN5 1066 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 MYOCQ99972 504 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 SELENOOQ9BVL4 669 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 DEF6Q9H4E7 631 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 SCUBE2Q9NQ36 999 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 SEPT11Q9NVA2 429 aaKnown RBP16.42■□□□□ 0.22
DDR1-234ENST00000424544 UCKL1Q9NWZ5 548 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 RAXQ9Y2V3 346 aa16.42■□□□□ 0.22
DDR1-234ENST00000424544 TDRD6O60522 2096 aaKnown RBP16.41■□□□□ 0.22
DDR1-234ENST00000424544 DDX3XO00571 662 aaKnown RBP eCLIP16.41■□□□□ 0.222e-8■■■■■ 32.9
DDR1-234ENST00000424544 TSPAN6O43657 245 aa16.41■□□□□ 0.22
DDR1-234ENST00000424544 PIAS2O75928 621 aa16.41■□□□□ 0.22
DDR1-234ENST00000424544 JUPP14923 745 aa16.41■□□□□ 0.22
DDR1-234ENST00000424544 CYLC1P35663 651 aaPredicted RBP16.41■□□□□ 0.22
DDR1-234ENST00000424544 ABL2P42684 1182 aa16.41■□□□□ 0.22
DDR1-234ENST00000424544 CLDN6P56747 220 aa16.41■□□□□ 0.22
DDR1-234ENST00000424544 YBEYP58557 167 aaPredicted RBP16.41■□□□□ 0.22
DDR1-234ENST00000424544 OGDHQ02218 1023 aa16.41■□□□□ 0.22
DDR1-234ENST00000424544 TARDBPQ13148 414 aaKnown RBP eCLIP16.41■□□□□ 0.22
DDR1-234ENST00000424544 CCDC157Q569K6 752 aa16.41■□□□□ 0.22
DDR1-234ENST00000424544 KYAT3Q6YP21 454 aaKnown RBP16.41■□□□□ 0.22
DDR1-234ENST00000424544 MCOLN2Q8IZK6 566 aa16.41■□□□□ 0.22
DDR1-234ENST00000424544 UMODL1-AS1Q8N2C9 162 aa16.41■□□□□ 0.22
DDR1-234ENST00000424544 VCPIP1Q96JH7 1222 aa16.41■□□□□ 0.22
DDR1-234ENST00000424544 TM6SF2Q9BZW4 377 aa16.41■□□□□ 0.22
DDR1-234ENST00000424544 KLC2Q9H0B6 622 aa16.41■□□□□ 0.22
DDR1-234ENST00000424544 FZD10Q9ULW2 581 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms