RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SERPINB8P50452 374 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 SLC12A2P55011 1212 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 CCDC15Q0P6D6 951 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 GPR158Q5T848 1215 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 GRTP1Q5TC63 336 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 MARC1Q5VT66 337 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 CCSAPQ6IQ19 270 aaPredicted RBP12.06□□□□□ -0.48
PTPRN-204ENST00000423636 ARCQ7LC44 396 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 ALG9Q9H6U8 611 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 TRPC7Q9HCX4 862 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 GMPR2Q9P2T1 348 aaKnown RBP12.06□□□□□ -0.48
PTPRN-204ENST00000423636 MCM8Q9UJA3 840 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 PPM1HQ9ULR3 514 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 Q9Y3F1 56 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 CBX4O00257 560 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 DLX3O60479 287 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 ZNF623O75123 536 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 SIX3O95343 332 aaPredicted RBP12.06□□□□□ -0.48
PTPRN-204ENST00000423636 CCDC166P0CW27 439 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 MLNP12872 115 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 YWHAQP27348 245 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 SCNN1AP37088 669 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 MLLT6P55198 1093 aaPredicted RBP12.06□□□□□ -0.48
PTPRN-204ENST00000423636 SCAPQ12770 1279 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 GEN1Q17RS7 908 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 TRIM71Q2Q1W2 868 aaKnown RBP12.06□□□□□ -0.48
PTPRN-204ENST00000423636 PKN3Q6P5Z2 889 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 ULK2Q8IYT8 1036 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 NSMCE3Q96MG7 304 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 C7orf26Q96N11 449 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 LENG8Q96PV6 779 aaPredicted RBP12.06□□□□□ -0.48
PTPRN-204ENST00000423636 HBEGFQ99075 208 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 IL22Q9GZX6 179 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 IL1RL2Q9HB29 575 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 KCNK4Q9NYG8 393 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 UTP6Q9NYH9 597 aaKnown RBP12.06□□□□□ -0.48
PTPRN-204ENST00000423636 SOX13Q9UN79 622 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 PCDHB7Q9Y5E2 793 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 ENO3P13929 434 aaPredicted RBP12.05□□□□□ -0.48
PTPRN-204ENST00000423636 ARL1P40616 181 aaPredicted RBP12.05□□□□□ -0.48
PTPRN-204ENST00000423636 POLD3Q15054 466 aaPredicted RBP12.05□□□□□ -0.48
PTPRN-204ENST00000423636 LPCAT4Q643R3 524 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 TMC7Q7Z402 723 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 DNAJC1Q96KC8 554 aaKnown RBP12.05□□□□□ -0.48
PTPRN-204ENST00000423636 SLC9A7Q96T83 725 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 CCDC106Q9BWC9 280 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 ADAM28Q9UKQ2 775 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 FBXO5Q9UKT4 447 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 A0A0C4DFX4 3053 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 KNL1Q8NG31 2342 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 MATN3O15232 486 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 ITGB6P18564 788 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 CSE1LP55060 971 aaKnown RBP12.05□□□□□ -0.48
PTPRN-204ENST00000423636 PITRM1Q5JRX3 1037 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 HABP4Q5JVS0 413 aaKnown RBP12.05□□□□□ -0.48
PTPRN-204ENST00000423636 SH2D4BQ5SQS7 431 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 SNX30Q5VWJ9 437 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 NEPROQ6NW34 567 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 KYAT3Q6YP21 454 aaKnown RBP12.05□□□□□ -0.48
PTPRN-204ENST00000423636 SCUBE1Q8IWY4 988 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 PPHLN1Q8NEY8 458 aaKnown RBP12.05□□□□□ -0.48
PTPRN-204ENST00000423636 RMDN1Q96DB5 314 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 TMA16Q96EY4 203 aaKnown RBP12.05□□□□□ -0.48
PTPRN-204ENST00000423636 CAPNS2Q96L46 248 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 DEFB118Q96PH6 123 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 CATSPERBQ9H7T0 1116 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 ARHGEF38Q9NXL2 777 aa12.05□□□□□ -0.48
PTPRN-204ENST00000423636 CAPN14A8MX76 684 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 ALDH2P05091 517 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 UBTFL6P0CB48 400 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-204ENST00000423636 TSHRP16473 764 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 SLC6A4P31645 630 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 ELF1P32519 619 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 PRAMEP78395 509 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 ECT2LQ008S8 904 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 TUBB3Q13509 450 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 GPNMBQ14956 572 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 NADSYN1Q6IA69 706 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 KBTBD2Q8IY47 623 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 RTL3Q8N8U3 475 aaKnown RBP12.04□□□□□ -0.48
PTPRN-204ENST00000423636 NPAS2Q99743 824 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 ZBED2Q9BTP6 218 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 POMKQ9H5K3 350 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 FBRSL1Q9HCM7 1045 aaKnown RBP12.04□□□□□ -0.48
PTPRN-204ENST00000423636 PRDM5Q9NQX1 630 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-204ENST00000423636 PCDHB5Q9Y5E4 795 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 C2orf78A6NCI8 922 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 IQCF5A8MTL0 148 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 ENPP3O14638 875 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 TRIM13O60858 407 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 ABL2P42684 1182 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 NUDT2P50583 147 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 LRRC73Q5JTD7 316 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 KIAA1841Q6NSI8 718 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 SNX32Q86XE0 403 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 TXNDC5Q8NBS9 432 aaKnown RBP12.04□□□□□ -0.48
PTPRN-204ENST00000423636 NUDT8Q8WV74 236 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 CCDC97Q96F63 343 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-204ENST00000423636 SLC39A3Q9BRY0 314 aa12.04□□□□□ -0.48
PTPRN-204ENST00000423636 SMOC2Q9H3U7 446 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms