RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 CSNK1DP48730 415 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 METAP1P53582 386 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 YPEL5P62699 121 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 FAM193AP78312 1265 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 NSUN2Q08J23 767 aaKnown RBP eCLIP8.77□□□□□ -1.01
MDC1-204ENST00000422266 TMEM259Q4ZIN3 620 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 ERAP2Q6P179 960 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 LAYNQ6UX15 382 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 KYAT3Q6YP21 454 aaKnown RBP8.77□□□□□ -1.01
MDC1-204ENST00000422266 RFX8Q6ZV50 586 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 TMPRSS7Q7RTY8 843 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 ABI3BPQ7Z7G0 1075 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 TMPRSS12Q86WS5 348 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 PYROXD2Q8N2H3 581 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 CHCHD4Q8N4Q1 142 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 CXorf40AQ8TE69 158 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 BTN2A2Q8WVV5 523 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 TEKT4Q8WW24 435 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 HMCESQ96FZ2 354 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 CNDP2Q96KP4 475 aaKnown RBP8.77□□□□□ -1.01
MDC1-204ENST00000422266 ZNF599Q96NL3 588 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 ATP13A3Q9H7F0 1226 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 SP110Q9HB58 689 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 USP29Q9HBJ7 922 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 KCTD5Q9NXV2 234 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 RCOR3Q9P2K3 495 aaPredicted RBP8.77□□□□□ -1.01
MDC1-204ENST00000422266 IPO11Q9UI26 975 aaKnown RBP8.77□□□□□ -1.01
MDC1-204ENST00000422266 SLCO1B1Q9Y6L6 691 aa8.77□□□□□ -1.01
MDC1-204ENST00000422266 NYNRINQ9P2P1 1898 aaKnown RBP8.77□□□□□ -1.01
MDC1-204ENST00000422266 CHD5Q8TDI0 1954 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 CFAP69A5D8W1 941 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 TMEM110-MUSTN1A8MSY1 372 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 PLK4O00444 970 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 PRAMEF11O60813 436 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 LRCH4O75427 683 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 RFPL3O75679 317 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 TM7SF2O76062 418 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 PAK4O96013 591 aaPredicted RBP8.76□□□□□ -1.01
MDC1-204ENST00000422266 UGT2B4P06133 528 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 CKMT2P17540 419 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 ERCC2P18074 760 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 SERPINA4P29622 427 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 HSPA9P38646 679 aaKnown RBP8.76□□□□□ -1.01
MDC1-204ENST00000422266 PBX1P40424 430 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 BLKP51451 505 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 DUSP3P51452 185 aaPredicted RBP8.76□□□□□ -1.01
MDC1-204ENST00000422266 E2F1Q01094 437 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 OGDHQ02218 1023 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 IL10RBQ08334 325 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 MAPK8IP2Q13387 824 aaPredicted RBP8.76□□□□□ -1.01
MDC1-204ENST00000422266 DPYSL2Q16555 572 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 ZSCAN23Q3MJ62 389 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 RAB6CQ53S08 254 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 PPP6R3Q5H9R7 873 aaPredicted RBP8.76□□□□□ -1.01
MDC1-204ENST00000422266 RALGPS1Q5JS13 557 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 KCNT1Q5JUK3 1230 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 ALKBH5Q6P6C2 394 aaKnown RBP8.76□□□□□ -1.01
MDC1-204ENST00000422266 TMCO3Q6UWJ1 677 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 CCNI2Q6ZMN8 369 aaPredicted RBP8.76□□□□□ -1.01
MDC1-204ENST00000422266 PARS2Q7L3T8 475 aaKnown RBP8.76□□□□□ -1.01
MDC1-204ENST00000422266 PARGQ86W56 976 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 MAP7D3Q8IWC1 876 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 CACTIN-AS1Q8N1I8 211 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 PAF1Q8N7H5 531 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 NIPA2Q8N8Q9 360 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 ATL2Q8NHH9 583 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 GATA6Q92908 595 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 KLHL32Q96NJ5 620 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 SNRNP25Q9BV90 132 aaKnown RBP8.76□□□□□ -1.01
MDC1-204ENST00000422266 CINPQ9BW66 212 aaPredicted RBP8.76□□□□□ -1.01
MDC1-204ENST00000422266 C1QTNF2Q9BXJ5 285 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 CALN1Q9BXU9 219 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 RAB6CQ9H0N0 254 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 DEF6Q9H4E7 631 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 LRRC19Q9H756 370 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 UVRAGQ9P2Y5 699 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 MYO1AQ9UBC5 1043 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 SEPT3Q9UH03 358 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 PCSK1NQ9UHG2 260 aa8.76□□□□□ -1.01
MDC1-204ENST00000422266 ZFR2Q9UPR6 939 aaKnown RBP8.76□□□□□ -1.01
MDC1-204ENST00000422266 COL5A1P20908 1838 aaPredicted RBP8.75□□□□□ -1.01
MDC1-204ENST00000422266 TRPM6Q9BX84 2022 aa8.75□□□□□ -1.01
MDC1-204ENST00000422266 SPTY2D1-AS1A0A0U1RR47 76 aa8.75□□□□□ -1.01
MDC1-204ENST00000422266 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.75□□□□□ -1.01
MDC1-204ENST00000422266 C1QTNF9BB2RNN3 333 aa8.75□□□□□ -1.01
MDC1-204ENST00000422266 KCNK3O14649 394 aa8.75□□□□□ -1.01
MDC1-204ENST00000422266 AREL1O15033 823 aa8.75□□□□□ -1.01
MDC1-204ENST00000422266 ATMINO43313 823 aaPredicted RBP8.75□□□□□ -1.01
MDC1-204ENST00000422266 H2AFZP0C0S5 128 aa8.75□□□□□ -1.01
MDC1-204ENST00000422266 ATXN1LP0C7T5 689 aaKnown RBP8.75□□□□□ -1.01
MDC1-204ENST00000422266 C1QTNF9P0C862 333 aa8.75□□□□□ -1.01
MDC1-204ENST00000422266 SKILP12757 684 aa8.75□□□□□ -1.01
MDC1-204ENST00000422266 KRT10P13645 584 aa8.75□□□□□ -1.01
MDC1-204ENST00000422266 PRLRP16471 622 aa8.75□□□□□ -1.01
MDC1-204ENST00000422266 HTR1BP28222 390 aa8.75□□□□□ -1.01
MDC1-204ENST00000422266 HNRNPH3P31942 346 aaKnown RBP8.75□□□□□ -1.01
MDC1-204ENST00000422266 PEX5P50542 639 aa8.75□□□□□ -1.01
MDC1-204ENST00000422266 PAPOLAP51003 745 aaKnown RBP8.75□□□□□ -1.01
MDC1-204ENST00000422266 THOP1P52888 689 aa8.75□□□□□ -1.01
MDC1-204ENST00000422266 AP1S1P61966 158 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms