RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 TRIM32Q13049 653 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 SNAPC2Q13487 334 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 MTMR9Q96QG7 549 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 COLEC11Q9BWP8 271 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 FAM126AQ9BYI3 521 aaPredicted RBP12.46□□□□□ -0.41
CLCN4-203ENST00000421085 SLC9A8Q9Y2E8 581 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 TBC1D30Q9Y2I9 924 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 A0A1W2PRG6 482 aa12.46□□□□□ -0.42
CLCN4-203ENST00000421085 LACTBL1A8MY62 500 aa12.46□□□□□ -0.42
CLCN4-203ENST00000421085 FARP2O94887 1054 aaPredicted RBP12.46□□□□□ -0.42
CLCN4-203ENST00000421085 BPGMP07738 259 aa12.46□□□□□ -0.42
CLCN4-203ENST00000421085 OR56A5P0C7T3 313 aa12.46□□□□□ -0.42
CLCN4-203ENST00000421085 CTXN3Q4LDR2 81 aa12.46□□□□□ -0.42
CLCN4-203ENST00000421085 PIWIL4Q7Z3Z4 852 aaKnown RBP12.46□□□□□ -0.42
CLCN4-203ENST00000421085 OSBPL7Q9BZF2 842 aa12.46□□□□□ -0.42
CLCN4-203ENST00000421085 PIGUQ9H490 435 aa12.46□□□□□ -0.42
CLCN4-203ENST00000421085 OSGEPL1Q9H4B0 414 aa12.46□□□□□ -0.42
CLCN4-203ENST00000421085 PMF1-BGLAPU3KQ54 211 aa12.46□□□□□ -0.42
CLCN4-203ENST00000421085 CEMIPQ8WUJ3 1361 aa12.46□□□□□ -0.42
CLCN4-203ENST00000421085 hCG_1818297A0A087WSY0 165 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 PSIP1O75475 530 aaKnown RBP12.45□□□□□ -0.42
CLCN4-203ENST00000421085 UMPSP11172 480 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 THPOP40225 353 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 FMO1Q01740 532 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 LIN54Q6MZP7 749 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 ZNF438Q7Z4V0 828 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 TXNRD3Q86VQ6 643 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 MAP4K3Q8IVH8 894 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 FAM71AQ8IYT1 594 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 GPRC5AQ8NFJ5 357 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 RDH11Q8TC12 318 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 SYTL5Q8TDW5 730 aaPredicted RBP12.45□□□□□ -0.42
CLCN4-203ENST00000421085 TRPM5Q9NZQ8 1165 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 FGFR1P11362 822 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 PGM5Q15124 567 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 CRY1Q16526 586 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 BRSK2Q8IWQ3 736 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 ASTN1O14525 1302 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 H7C4K7 107 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 MGRN1O60291 552 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 MLYCDO95822 493 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 EGFRP00533 1210 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 FSTL1Q12841 308 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 GNASQ5JWF2 1037 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 SLC25A24Q6NUK1 477 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 GK5Q6ZS86 529 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 FBXO16Q8IX29 292 aaPredicted RBP12.45□□□□□ -0.42
CLCN4-203ENST00000421085 LRRC4CQ9HCJ2 640 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 XPR1Q9UBH6 696 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 FFAR3O14843 346 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 GPR182O15218 404 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 GPR42O15529 346 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 RHAGQ02094 409 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 SLC1A5Q15758 541 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 IRF2BP2Q7Z5L9 587 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 TAF8Q7Z7C8 310 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 SUN5Q8TC36 379 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 RNF157Q96PX1 679 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 PDCD2LQ9BRP1 358 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 ATP13A1Q9HD20 1204 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 SLC12A4Q9UP95 1085 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 TDRKHQ9Y2W6 561 aaKnown RBP12.45□□□□□ -0.42
CLCN4-203ENST00000421085 RNF225M0QZC1 329 aaPredicted RBP12.45□□□□□ -0.42
CLCN4-203ENST00000421085 DDX3YO15523 660 aaKnown RBP12.45□□□□□ -0.42
CLCN4-203ENST00000421085 NFKB1P19838 968 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 HNRNPH3P31942 346 aaKnown RBP12.45□□□□□ -0.42
CLCN4-203ENST00000421085 RPL38P63173 70 aaKnown RBP12.45□□□□□ -0.42
CLCN4-203ENST00000421085 MYOZ2Q9NPC6 264 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 TLR8Q9NR97 1041 aaKnown RBP12.45□□□□□ -0.42
CLCN4-203ENST00000421085 RNF181Q9P0P0 153 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 MAPRE3Q9UPY8 281 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 ZBTB14O43829 449 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 KLF10Q13118 480 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 TYSND1Q2T9J0 566 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 RFX4Q33E94 735 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 KHDC1Q4VXA5 237 aaKnown RBP12.45□□□□□ -0.42
CLCN4-203ENST00000421085 ARHGAP15Q53QZ3 475 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 PHF10Q8WUB8 498 aaKnown RBP12.45□□□□□ -0.42
CLCN4-203ENST00000421085 WDR55Q9H6Y2 383 aaPredicted RBP12.45□□□□□ -0.42
CLCN4-203ENST00000421085 POPDC2Q9HBU9 364 aa12.45□□□□□ -0.42
CLCN4-203ENST00000421085 TTLL13PA6NNM8 815 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 PRG2P13727 222 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 ALDH7A1P49419 539 aaKnown RBP12.44□□□□□ -0.42
CLCN4-203ENST00000421085 RPS6KA3P51812 740 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 ZNF143P52747 638 aaPredicted RBP12.44□□□□□ -0.42
CLCN4-203ENST00000421085 RTP1P59025 263 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 SPIBQ01892 262 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 PGBD2Q6P3X8 592 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 SPPL2CQ8IUH8 684 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 FAM20CQ8IXL6 584 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 H3BNX3 289 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 DYRK3O43781 588 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 CAPGP40121 348 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 CLCN5P51795 746 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 KPNA1P52294 538 aaPredicted RBP12.44□□□□□ -0.42
CLCN4-203ENST00000421085 TAS2R40P59535 323 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 ACVR2BQ13705 512 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 STXBP5Q5T5C0 1151 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 RASSF6Q6ZTQ3 369 aa12.44□□□□□ -0.42
CLCN4-203ENST00000421085 TMEM139Q8IV31 216 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms