RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 PGAM4Q8N0Y7 254 aa11.83□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 BHLHE22Q8NFJ8 381 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SCAMP5Q8TAC9 235 aa11.83□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PDCD6IPQ8WUM4 868 aaKnown RBP11.83□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 FAR2Q96K12 515 aa11.83□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PIDD1Q9HB75 910 aa11.83□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TMEM30AQ9NV96 361 aa11.83□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 HNRNPLP14866 589 aaKnown RBP eCLIP11.83□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 BRCC3P46736 316 aa11.83□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 THOP1P52888 689 aa11.83□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PABPC5Q96DU9 382 aaKnown RBP11.83□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TSGA13Q96PP4 275 aa11.83□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SLC39A8Q9C0K1 460 aa11.83□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 NUP205Q92621 2012 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ZSWIM8A7E2V4 1837 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 UNCXA6NJT0 531 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 HAS3O00219 553 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 IRAK2O43187 625 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MSI1O43347 362 aaKnown RBP11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SNUPNO95149 360 aaKnown RBP11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 DNAJB1P25685 340 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 DLG1Q12959 904 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CENPLQ8N0S6 344 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 GALNT15Q8N3T1 639 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 C3orf58Q8NDZ4 430 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 BTBD9Q96Q07 612 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 HAPLN3Q96S86 360 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ZDHHC7Q9NXF8 308 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 HEATR9A2RTY3 570 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CHN2P52757 468 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SH3BGRP55822 239 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 STX1BP61266 288 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 LIN52Q52LA3 116 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 NDNQ99608 321 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PAAF1Q9BRP4 392 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 COPS7BQ9H9Q2 264 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SP110Q9HB58 689 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MIOSQ9NXC5 875 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SLC2A6Q9UGQ3 507 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RBP1P09455 135 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 GSTT1P30711 240 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RENBPP51606 427 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PLK1P53350 603 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 WNT3AP56704 352 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CACNB2Q08289 660 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 HNRNPDQ14103 355 aaKnown RBP11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CCL14Q16627 93 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CEP97Q8IW35 865 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MFN1Q8IWA4 741 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ZSCAN18Q8TBC5 510 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 HEXDCQ8WVB3 486 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 DLG3Q92796 817 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PHF21BQ96EK2 531 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ZBTB26Q9HCK0 441 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MPP6Q9NZW5 540 aa11.82□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 GRID2O43424 1007 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 NPHS1O60500 1241 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ZNF865P0CJ78 1059 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 XRCC1P18887 633 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 GABRB3P28472 473 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 HTR7P34969 479 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PDAP1Q13442 181 aaKnown RBP11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 GALNT4Q8N4A0 578 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 NPAS2Q99743 824 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 C1QTNF1Q9BXJ1 281 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CSNK1G1Q9HCP0 422 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 NT5MQ9NPB1 228 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 NOD1Q9Y239 953 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TMEM233B4DJY2 109 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 UBDO15205 165 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PEX1O43933 1283 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TADA2AO75478 443 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 HLA-DQB2P05538 268 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CCDC166P0CW27 439 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RGS2P41220 211 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CHRNA4P43681 627 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TAF1CQ15572 869 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 UPP1Q16831 310 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 KIAA0930Q6ICG6 404 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TFAP2DQ7Z6R9 452 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 LRRC49Q8IUZ0 686 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RYBPQ8N488 228 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 DCUN1D1Q96GG9 259 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 COPG1Q9Y678 874 aaKnown RBP11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CCDC189A1A4V9 331 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 NEMP2A6NFY4 417 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 HHLA1C9JL84 531 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MAFKO60675 156 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PGK1P00558 417 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SERPINH1P50454 418 aaKnown RBP11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SLC5A3P53794 718 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PURAQ00577 322 aaKnown RBP11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ITGA7Q13683 1181 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MAP7Q14244 749 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 HERC3Q15034 1050 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MARC1Q5VT66 337 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SPRYD7Q5W111 196 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CXCL17Q6UXB2 119 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 KIAA0408Q6ZU52 694 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms