RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 ARL4DP49703 201 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 LPIN1Q14693 890 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 TPGS2Q68CL5 300 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 TRIM48Q8IWZ4 208 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 MYO1HQ8N1T3 1032 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 PTPN18Q99952 460 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 SLC7A5P2Q9GIP4 190 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 SIX2Q9NPC8 291 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 CASS4Q9NQ75 786 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 ETNK2Q9NVF9 386 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 HNRNPCL2B2RXH8 293 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 SLCO1B7G3V0H7 640 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 PRPF4O43172 522 aaKnown RBP eCLIP12.94□□□□□ -0.343e-6■■□□□ 11.5
SCAF8-203ENST00000417268 PHGDHO43175 533 aaKnown RBP12.94□□□□□ -0.34
SCAF8-203ENST00000417268 MAP3K13O43283 966 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 CLDN11O75508 207 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 LCA5LO95447 670 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 ITGAVP06756 1048 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 FASP25445 335 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 CD151P48509 253 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 SPANXN3Q5MJ09 141 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 ARMC3Q5W041 872 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 ARMC6Q6NXE6 501 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 NPNTQ6UXI9 565 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 SZRD1Q7Z422 152 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 GLT6D1Q7Z4J2 308 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 TAGAPQ8N103 731 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 RIN3Q8TB24 985 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 TUBGCP3Q96CW5 907 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 PPP1R16AQ96I34 528 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 GP5P40197 560 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 CHRNB3Q05901 458 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 KRR1Q13601 381 aaKnown RBP12.94□□□□□ -0.34
SCAF8-203ENST00000417268 TRIM25Q14258 630 aaKnown RBP12.94□□□□□ -0.34
SCAF8-203ENST00000417268 ZNF697Q5TEC3 545 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 FBXL19Q6PCT2 694 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 PRSS55Q6UWB4 352 aaPredicted RBP12.94□□□□□ -0.34
SCAF8-203ENST00000417268 ULK2Q8IYT8 1036 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 SNX31Q8N9S9 440 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 CFAP97Q9P2B7 532 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 SALL4Q9UJQ4 1053 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 PACSIN3Q9UKS6 424 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 AK5Q9Y6K8 562 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 ABCA3Q99758 1704 aa12.94□□□□□ -0.34
SCAF8-203ENST00000417268 CHADO15335 359 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 PIAS1O75925 651 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 ADH1CP00326 375 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 SERPINH1P50454 418 aaKnown RBP12.93□□□□□ -0.34
SCAF8-203ENST00000417268 LIN52Q52LA3 116 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 PPP1R15BQ5SWA1 713 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 USP45Q70EL2 814 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 ALG3Q92685 438 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 DENND2DQ9H6A0 471 aaPredicted RBP12.93□□□□□ -0.34
SCAF8-203ENST00000417268 PLGRKTQ9HBL7 147 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 ARL8BQ9NVJ2 186 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 WWOXQ9NZC7 414 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 TMCO1Q9UM00 188 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 TMA7Q9Y2S6 64 aaKnown RBP12.93□□□□□ -0.34
SCAF8-203ENST00000417268 ADGRA2Q96PE1 1338 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 KANSL1LA0AUZ9 987 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 GSC2O15499 205 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 ZNF7P17097 686 aaPredicted RBP12.93□□□□□ -0.34
SCAF8-203ENST00000417268 POU4F1Q01851 419 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 RSBN1Q5VWQ0 802 aaPredicted RBP12.93□□□□□ -0.34
SCAF8-203ENST00000417268 CCDC80Q76M96 950 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 CRYBG2Q8N1P7 616 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 KREMEN2Q8NCW0 462 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 FAR2Q96K12 515 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 IL22Q9GZX6 179 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 STN1Q9H668 368 aaKnown RBP12.93□□□□□ -0.34
SCAF8-203ENST00000417268 CYP4F12Q9HCS2 524 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 THSD7AQ9UPZ6 1657 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 MSI1O43347 362 aaKnown RBP12.93□□□□□ -0.34
SCAF8-203ENST00000417268 ASNA1O43681 348 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 MT-CO1P00395 513 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 RPL17P18621 184 aaKnown RBP12.93□□□□□ -0.34
SCAF8-203ENST00000417268 HTR7P34969 479 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 GALK1P51570 392 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 DAOAP59103 153 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 PLIN5Q00G26 463 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 FOLH1Q04609 750 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 SPDYAQ5MJ70 313 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 OTUD3Q5T2D3 398 aaPredicted RBP12.93□□□□□ -0.34
SCAF8-203ENST00000417268 OLFML1Q6UWY5 402 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 SERPINA13PQ6UXR4 307 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 HOMEZQ8IX15 550 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 GPAMQ9HCL2 828 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 CCL16O15467 120 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 LRCH4O75427 683 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 MFN2O95140 757 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 VAPBO95292 243 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 C8AP07357 584 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 RBP1P09455 135 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 PTPN2P17706 415 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 PSMB4P28070 264 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 PTPN7P35236 360 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 LBX1P52954 281 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 CLNKQ7Z7G1 428 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 KCNMB4Q86W47 210 aa12.93□□□□□ -0.34
SCAF8-203ENST00000417268 ARNTL2Q8WYA1 636 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms