RNA–Protein interactions for RNA: ENST00000416957.5

FNDC3B-203, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 3,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-203ENST00000416957 OPN1MW3P0DN78 364 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 TCN1P20061 433 aaPredicted RBP8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 BMI1P35226 326 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 OR3A3P47888 321 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 GRB14Q14449 540 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 TRADDQ15628 312 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 BRMS1LQ5PSV4 323 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 CCNI2Q6ZMN8 369 aaPredicted RBP8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 CDKL3Q8IVW4 592 aaPredicted RBP8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 GALNT12Q8IXK2 581 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 AFAP1L2Q8N4X5 818 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 TRPV3Q8NET8 790 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 GRIN3AQ8TCU5 1115 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 DTD1Q8TEA8 209 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 CLEC4DQ8WXI8 215 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 BORCS5Q969J3 196 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 ASB2Q96Q27 587 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 TRIM39Q9HCM9 518 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 C6orf50Q9HD87 102 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 RNF146Q9NTX7 359 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 SLC38A7Q9NVC3 462 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 IFT80Q9P2H3 777 aaPredicted RBP8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 ARHGAP6O43182 974 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 PPP1R11O60927 126 aaPredicted RBP8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 MYO1DO94832 1006 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 SCAF4O95104 1147 aaKnown RBP8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 HDCP19113 662 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 RRM2P31350 389 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 CASP4P49662 377 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 CAPZA1P52907 286 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 ATP6V0D1P61421 351 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 TAP2Q03519 686 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 DBPQ10586 325 aaPredicted RBP8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 ZNF177Q13360 481 aaPredicted RBP8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 NAB1Q13506 487 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 DHCR24Q15392 516 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 ARHGEF16Q5VV41 709 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 GPR139Q6DWJ6 353 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 PLEKHH3Q7Z736 793 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 TAGAPQ8N103 731 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 OXR1Q8N573 874 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 NECAB1Q8N987 351 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 CLHC1Q8NHS4 586 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 COG4Q9H9E3 785 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 ETNK1Q9HBU6 452 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 TXNRD2Q9NNW7 524 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 CHORDC1Q9UHD1 332 aaPredicted RBP8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 DNMT3LQ9UJW3 386 aa8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 NOC2LQ9Y3T9 749 aaKnown RBP8.56□□□□□ -1.04
FNDC3B-203ENST00000416957 SRCAPQ6ZRS2 3230 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 LOC100653049A0A140TA62 436 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 GPR25O00155 361 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 SLC22A1O15245 554 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 KRT34O76011 436 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 UBOX5O94941 541 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 STAU1O95793 577 aaKnown RBP8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 HOXC6P09630 235 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 TYRP1P17643 537 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 CCND2P30279 289 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 TALDO1P37837 337 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 SP3Q02447 781 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 PTPN11Q06124 597 aaPredicted RBP8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 ART3Q13508 389 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 SCARB2Q14108 478 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 RNF207Q6ZRF8 634 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 SLC16A12Q6ZSM3 486 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 ARID3BQ8IVW6 561 aaPredicted RBP8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 ASCC1Q8N9N2 400 aaKnown RBP8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 OR6B3Q8NGW1 331 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 LRRC20Q8TCA0 184 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 RNF34Q969K3 372 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 ZUFSPQ96AP4 578 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 FAM83CQ9BQN1 747 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 ZNF518BQ9C0D4 1074 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 RAVER2Q9HCJ3 691 aaKnown RBP8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 ZMYM5Q9UJ78 669 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 GPR34Q9UPC5 381 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 NR2E1Q9Y466 385 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 PCDHA1Q9Y5I3 950 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 V9GY48 417 aaPredicted RBP8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 ZNFX1Q9P2E3 1918 aaKnown RBP8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 NRCAMQ92823 1304 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 CCNT2O60583 730 aaKnown RBP8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 SRGAP2O75044 1071 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 DGAT1O75907 488 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 CRTAMO95727 393 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 PTPREP23469 700 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 PTX3P26022 381 aaPredicted RBP8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 NUP62P37198 522 aaPredicted RBP8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 TPTEP56180 551 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 ORC2Q13416 577 aaPredicted RBP8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 STARD3Q14849 445 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 MORN1Q5T089 497 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 UBE2UQ5VVX9 321 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 NKAPQ8N5F7 415 aaKnown RBP8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 LEMD2Q8NC56 503 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 DNERQ8NFT8 737 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 SNX19Q92543 992 aa8.55□□□□□ -1.04
FNDC3B-203ENST00000416957 PPM1MQ96MI6 270 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms