RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 FBXO44Q9H4M3 255 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 KCNK9Q9NPC2 374 aa17.42■□□□□ 0.38
PTPRC-206ENST00000413409 ASXL3Q9C0F0 2248 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 SPAARA0A1B0GVQ0 90 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 RHOBTB1O94844 696 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 PRKCHP24723 683 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 IRX4P78413 519 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 COG7P83436 770 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 AP1B1Q10567 949 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 SMARCB1Q12824 385 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 EFTUD2Q15029 972 aaKnown RBP eCLIP17.41■□□□□ 0.38
PTPRC-206ENST00000413409 STEAP4Q687X5 459 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 FSTL4Q6MZW2 842 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 SCD5Q86SK9 330 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 SRLQ86TD4 932 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 ARID3BQ8IVW6 561 aaPredicted RBP17.41■□□□□ 0.38
PTPRC-206ENST00000413409 MZB1Q8WU39 189 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 ALKBH8Q96BT7 664 aaKnown RBP17.41■□□□□ 0.38
PTPRC-206ENST00000413409 CHFRQ96EP1 664 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 SERPINB11Q96P15 392 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 HHIPQ96QV1 700 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 PRMT1Q99873 361 aaKnown RBP17.41■□□□□ 0.38
PTPRC-206ENST00000413409 ASAH2Q9NR71 780 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 ABI2Q9NYB9 513 aaPredicted RBP17.41■□□□□ 0.38
PTPRC-206ENST00000413409 IL37Q9NZH6 218 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 OR12D3Q9UGF7 316 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 ZC3H7BQ9UGR2 993 aaKnown RBP17.41■□□□□ 0.38
PTPRC-206ENST00000413409 ZNF180Q9UJW8 692 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 NEU3Q9UQ49 428 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 NUP205Q92621 2012 aa17.41■□□□□ 0.38
PTPRC-206ENST00000413409 ZNF638Q14966 1978 aaKnown RBP17.41■□□□□ 0.38
PTPRC-206ENST00000413409 KALRNO60229 2985 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 KIF26AQ9ULI4 1882 aaPredicted RBP17.4■□□□□ 0.38
PTPRC-206ENST00000413409 IQANK1A0A1B0GTG1 560 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 FAM221BA6H8Z2 402 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 KHNYNO15037 678 aaKnown RBP17.4■□□□□ 0.38
PTPRC-206ENST00000413409 FGF10O15520 208 aaPredicted RBP17.4■□□□□ 0.38
PTPRC-206ENST00000413409 FAM155BO75949 473 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 LRIG2O94898 1065 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 C1QAP02745 245 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 OR4Q2P0C623 313 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 CCR1P32246 355 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 MPP2Q14168 576 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 CTXN3Q4LDR2 81 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 MANEALQ5VSG8 457 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 GKAP1Q5VSY0 366 aaPredicted RBP17.4■□□□□ 0.38
PTPRC-206ENST00000413409 LRRC8BQ6P9F7 803 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 CYS1Q717R9 158 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 YTHDF3Q7Z739 585 aaKnown RBP17.4■□□□□ 0.38
PTPRC-206ENST00000413409 CPLX4Q7Z7G2 160 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 CCNJLQ8IV13 435 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 CACNA2D3Q8IZS8 1091 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 NUP93Q8N1F7 819 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 CAMKK1Q8N5S9 505 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 ANKRD42Q8N9B4 389 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 CFAP36Q96G28 342 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 SIGLEC10Q96LC7 697 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 VAT1Q99536 393 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 EBNA1BP2Q99848 306 aaKnown RBP17.4■□□□□ 0.38
PTPRC-206ENST00000413409 ZMYND15Q9H091 742 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 COMMD8Q9NX08 183 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 TRHDEQ9UKU6 1024 aa17.4■□□□□ 0.38
PTPRC-206ENST00000413409 TENM4Q6N022 2769 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 A0A1W2PRU2 124 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 FAM92AA1XBS5 289 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 APOEP02649 317 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 PTPN3P26045 913 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 IFNAR2P48551 515 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 IL9RQ01113 521 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 IFRD2Q12894 506 aaPredicted RBP17.39■□□□□ 0.37
PTPRC-206ENST00000413409 QPCTQ16769 361 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 TMEM196Q5HYL7 178 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 MON1AQ86VX9 555 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 TMC8Q8IU68 726 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 SCN4BQ8IWT1 228 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 ZNF567Q8N184 647 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 ELMOD1Q8N336 334 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 NPWQ8N729 165 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 CCNYQ8ND76 341 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 GSDMBQ8TAX9 411 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 SPPL2BQ8TCT7 592 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 DENND1AQ8TEH3 1009 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 C2orf15Q8WU43 125 aaKnown RBP17.39■□□□□ 0.37
PTPRC-206ENST00000413409 LRRN4Q8WUT4 740 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 RNF34Q969K3 372 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 MAGEB18Q96M61 343 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 NAT9Q9BTE0 207 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 INVSQ9Y283 1065 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 RRP15Q9Y3B9 282 aaKnown RBP17.39■□□□□ 0.37
PTPRC-206ENST00000413409 IKBKGQ9Y6K9 419 aa17.39■□□□□ 0.37
PTPRC-206ENST00000413409 A0A1W2PQH9 124 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 ERI2A8K979 691 aaKnown RBP17.38■□□□□ 0.37
PTPRC-206ENST00000413409 H7C4K7 107 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 TYROBPO43914 113 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 AVILO75366 819 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 SUN1O94901 812 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 ZWINTO95229 277 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 INHBAP08476 426 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 PSMB4P28070 264 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 EPHB2P29323 1055 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms