RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 SLC25A51Q9H1U9 297 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 DKK3Q9UBP4 350 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 APPL1Q9UKG1 709 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 APOBEC2Q9Y235 224 aaKnown RBP8.62□□□□□ -1.03
SYNE1-211ENST00000413186 ZNF840PA6NDX5 716 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 GOLGA8RI6L899 631 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 ALDH1A2O94788 518 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 TPH1P17752 444 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 TPSB2P20231 275 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 ARFIP2P53365 341 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 ZNF33AQ06730 810 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 TPSAB1Q15661 275 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 ADCK1Q86TW2 530 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 HS6ST3Q8IZP7 471 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 EFHD2Q96C19 240 aaPredicted RBP8.62□□□□□ -1.03
SYNE1-211ENST00000413186 EML4Q9HC35 981 aaKnown RBP8.62□□□□□ -1.03
SYNE1-211ENST00000413186 WDR6Q9NNW5 1121 aaKnown RBP8.62□□□□□ -1.03
SYNE1-211ENST00000413186 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.62□□□□□ -1.03
SYNE1-211ENST00000413186 FAM8A1Q9UBU6 413 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 TSC22D4Q9Y3Q8 395 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 TMEM120BA0PK00 339 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 AFF1P51825 1210 aaKnown RBP8.62□□□□□ -1.03
SYNE1-211ENST00000413186 HIC1Q14526 733 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 ACOX1Q15067 660 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 FAM133BQ5BKY9 247 aaKnown RBP8.62□□□□□ -1.03
SYNE1-211ENST00000413186 SH3PXD2AQ5TCZ1 1133 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 STRA8Q7Z7C7 330 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 KCNMB4Q86W47 210 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 CFAP61Q8NHU2 1237 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 CXorf40AQ8TE69 158 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 IRF7Q92985 503 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 DCDC2Q9UHG0 476 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 NR2E1Q9Y466 385 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 A0A1B0GW55 424 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 H3BMM5 538 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 H3BQF6 201 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 GCATO75600 419 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 HAUS5O94927 633 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 IL1BP01584 269 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 DUX4L2P0CJ85 424 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 DUX4L3P0CJ86 424 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 DUX4L4P0CJ87 422 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 DUX4L5P0CJ88 424 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 DUX4L6P0CJ89 424 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 DUX4L7P0CJ90 424 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 PFKPQ01813 784 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 MUM1Q2TAK8 710 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 MROH9Q5TGP6 573 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 LRRTM3Q86VH5 581 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 DCLK2Q8N568 766 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 OR52K1Q8NGK4 314 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 GRIN3AQ8TCU5 1115 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 C10orf88Q9H8K7 445 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 NDE1Q9NXR1 346 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 UTP6Q9NYH9 597 aaKnown RBP8.62□□□□□ -1.03
SYNE1-211ENST00000413186 EPS15L1Q9UBC2 864 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 DUX4Q9UBX2 424 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 ZFP69BQ9UJL9 534 aa8.62□□□□□ -1.03
SYNE1-211ENST00000413186 TRPM7Q96QT4 1865 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 GLRA3O75311 464 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 MTRF1O75570 445 aaKnown RBP8.61□□□□□ -1.03
SYNE1-211ENST00000413186 POP4O95707 220 aaKnown RBP8.61□□□□□ -1.03
SYNE1-211ENST00000413186 CD48P09326 243 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 MSH3P20585 1137 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 MAGEA10P43363 369 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-211ENST00000413186 ATXN1P54253 815 aaKnown RBP8.61□□□□□ -1.03
SYNE1-211ENST00000413186 POLE2P56282 527 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 GRTP1Q5TC63 336 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 PM20D1Q6GTS8 502 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 MSANTD2Q6P1R3 559 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 UBR7Q8N806 425 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 ZNF513Q8N8E2 541 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-211ENST00000413186 OR7D4Q8NG98 312 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 CENPTQ96BT3 561 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 SEC16BQ96JE7 1060 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 PAFAH2Q99487 392 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 KLHL31Q9H511 634 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 STN1Q9H668 368 aaKnown RBP8.61□□□□□ -1.03
SYNE1-211ENST00000413186 ABCF3Q9NUQ8 709 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 PCMTD2Q9NV79 361 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 PCP4L1A6NKN8 68 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 USP12O75317 370 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 SASH3O75995 380 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 BEST1O76090 585 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 VAPBO95292 243 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 PABPC1P11940 636 aaKnown RBP8.61□□□□□ -1.03
SYNE1-211ENST00000413186 FOSL1P15407 271 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 GJA1P17302 382 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 KCNQ1P51787 676 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 ZDHHC20Q5W0Z9 365 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 OR2W6PQ8NHA6 318 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 ZSCAN18Q8TBC5 510 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-211ENST00000413186 SLC22A17Q8WUG5 538 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 CCDC126Q96EE4 140 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 PANX3Q96QZ0 392 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 ZNF446Q9NWS9 450 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 DTLQ9NZJ0 730 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 ACTL7BQ9Y614 415 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 HS3ST4Q9Y661 456 aa8.61□□□□□ -1.03
SYNE1-211ENST00000413186 MYH15Q9Y2K3 1946 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms