RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 TRIM65Q6PJ69 517 aa17.18■□□□□ 0.34
SCRN1-203ENST00000409570 LRRC31Q6UY01 552 aa17.18■□□□□ 0.34
SCRN1-203ENST00000409570 ZNF783Q6ZMS7 281 aa17.18■□□□□ 0.34
SCRN1-203ENST00000409570 B3GNT8Q7Z7M8 397 aa17.18■□□□□ 0.34
SCRN1-203ENST00000409570 NT5C3BQ969T7 300 aa17.18■□□□□ 0.34
SCRN1-203ENST00000409570 RAB7BQ96AH8 199 aa17.18■□□□□ 0.34
SCRN1-203ENST00000409570 VOPP1Q96AW1 172 aa17.18■□□□□ 0.34
SCRN1-203ENST00000409570 CENPTQ96BT3 561 aa17.18■□□□□ 0.34
SCRN1-203ENST00000409570 PGAP3Q96FM1 320 aaPredicted RBP17.18■□□□□ 0.34
SCRN1-203ENST00000409570 CRACR2AQ9BSW2 395 aa17.18■□□□□ 0.34
SCRN1-203ENST00000409570 SRRTQ9BXP5 876 aaKnown RBP17.18■□□□□ 0.34
SCRN1-203ENST00000409570 SYNDIG1Q9H7V2 258 aa17.18■□□□□ 0.34
SCRN1-203ENST00000409570 ATP13A1Q9HD20 1204 aa17.18■□□□□ 0.34
SCRN1-203ENST00000409570 STARD5Q9NSY2 213 aa17.18■□□□□ 0.34
SCRN1-203ENST00000409570 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.18■□□□□ 0.34
SCRN1-203ENST00000409570 PCDHGA7Q9Y5G6 932 aa17.18■□□□□ 0.34
SCRN1-203ENST00000409570 ANKRD36A6QL64 1941 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 C16orf96A6NNT2 1141 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 GNA14O95837 355 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 CELA2BP08218 269 aaPredicted RBP17.17■□□□□ 0.34
SCRN1-203ENST00000409570 TSHRP16473 764 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 GKP32189 559 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 THOP1P52888 689 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 NFKB2Q00653 900 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 APBA1Q02410 837 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 SRSF1Q07955 248 aaKnown RBP eCLIP17.17■□□□□ 0.34
SCRN1-203ENST00000409570 PTK2BQ14289 1009 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 TGIF1Q15583 401 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 XKR5Q6UX68 686 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 FBXO39Q8N4B4 442 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 SHC3Q92529 594 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 SGF29Q96ES7 293 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 TIGD1Q96MW7 591 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 TBCBQ99426 244 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 TM6SF2Q9BZW4 377 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 WDR70Q9NW82 654 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 RABGEF1Q9UJ41 708 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 CTNND2Q9UQB3 1225 aa17.17■□□□□ 0.34
SCRN1-203ENST00000409570 BICDL2A1A5D9 508 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 SRGAP2O75044 1071 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 GJB6O95452 261 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 ITGB6P18564 788 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 SLC9A1P19634 815 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 UGT1A5P35504 534 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 STX17P56962 302 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 RNASE9P60153 205 aaKnown RBP17.16■□□□□ 0.34
SCRN1-203ENST00000409570 GNA12Q03113 381 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 DEUP1Q05D60 604 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 EIF3IQ13347 325 aaKnown RBP17.16■□□□□ 0.34
SCRN1-203ENST00000409570 ZNF805Q5CZA5 627 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 FAXCQ5TGI0 409 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 ESRP1Q6NXG1 681 aaKnown RBP17.16■□□□□ 0.34
SCRN1-203ENST00000409570 USP53Q70EK8 1073 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 RAB11FIP2Q7L804 512 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 VPS36Q86VN1 386 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 PLPP6Q8IY26 295 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 OR6K2Q8NGY2 324 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 EXTL1Q92935 676 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 FAM81BQ96LP2 452 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 SLC13A1Q9BZW2 595 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 EPB41L5Q9HCM4 733 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 ACSL6Q9UKU0 697 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 STAP1Q9ULZ2 295 aa17.16■□□□□ 0.34
SCRN1-203ENST00000409570 NEMP1O14524 444 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 AREL1O15033 823 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 F9P00740 461 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 HGFP14210 728 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 SNX16P57768 344 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 YPEL5P62699 121 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 MACC1Q6ZN28 852 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 JAMLQ86YT9 394 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 KYQ8NBH2 561 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 CCDC74AQ96AQ1 378 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 ISG20Q96AZ6 181 aaKnown RBP17.15■□□□□ 0.34
SCRN1-203ENST00000409570 FOXP3Q9BZS1 431 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 SYNCQ9H7C4 482 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 GULP1Q9UBP9 304 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 APEX2Q9UBZ4 518 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 HOOK1Q9UJC3 728 aaKnown RBP17.15■□□□□ 0.34
SCRN1-203ENST00000409570 NBASA2RRP1 2371 aa17.15■□□□□ 0.34
SCRN1-203ENST00000409570 A0A1W2PQM1 296 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 D6RAR5 112 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 ITGB2P05107 769 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 ACVRL1P37023 503 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 EIF4A3P38919 411 aaKnown RBP17.14■□□□□ 0.33
SCRN1-203ENST00000409570 CCL7P80098 99 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 PPARDQ03181 441 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 SLC25A52Q3SY17 297 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 ACBD5Q5T8D3 534 aaPredicted RBP17.14■□□□□ 0.33
SCRN1-203ENST00000409570 ATG14Q6ZNE5 492 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 ZDHHC17Q8IUH5 632 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 DRC7Q8IY82 874 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 SDR16C5Q8N3Y7 309 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 RYBPQ8N488 228 aaPredicted RBP17.14■□□□□ 0.33
SCRN1-203ENST00000409570 ARL10Q8N8L6 244 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 TP53I13Q8NBR0 393 aaPredicted RBP17.14■□□□□ 0.33
SCRN1-203ENST00000409570 GFM1Q96RP9 751 aaKnown RBP17.14■□□□□ 0.33
SCRN1-203ENST00000409570 HAPLN3Q96S86 360 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 ARHGAP9Q9BRR9 750 aa17.14■□□□□ 0.33
SCRN1-203ENST00000409570 ZYG11BQ9C0D3 744 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms