RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 RHDQ02161 417 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 ZNF460Q14592 562 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 PRAMEF19Q5SWL8 479 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 TRNP1Q6NT89 227 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 RWDD4Q6NW29 188 aaKnown RBP17.26■□□□□ 0.35
PTPRA-205ENST00000399903 DHFR2Q86XF0 187 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 MAGEE2Q8TD90 523 aaPredicted RBP17.26■□□□□ 0.35
PTPRA-205ENST00000399903 ASB9Q96DX5 294 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 FAM49AQ9H0Q0 323 aaPredicted RBP17.26■□□□□ 0.35
PTPRA-205ENST00000399903 ZBTB26Q9HCK0 441 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 POLE4Q9NR33 117 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 DUS2Q9NX74 493 aaKnown RBP17.26■□□□□ 0.35
PTPRA-205ENST00000399903 GIN1Q9NXP7 522 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 G3V2L1 256 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 TGFB3P10600 412 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 TPH1P17752 444 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 CLDN10P78369 228 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 IGFN1Q86VF2 1251 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 SPPL2CQ8IUH8 684 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 TMEM126BQ8IUX1 230 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 Q8N9G6 341 aaPredicted RBP17.26■□□□□ 0.35
PTPRA-205ENST00000399903 URGCPQ8TCY9 931 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 SLCO4A1Q96BD0 722 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 MUC3BQ9H195 1237 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 FANCEQ9HB96 536 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 PCDHGC3Q9UN70 934 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 RUVBL2Q9Y230 463 aaKnown RBP17.26■□□□□ 0.35
PTPRA-205ENST00000399903 RAP2CQ9Y3L5 183 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 POLBP06746 335 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 HOXC6P09630 235 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 IL4RP24394 825 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 PSMB4P28070 264 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 SPRP35270 261 aaPredicted RBP17.25■□□□□ 0.35
PTPRA-205ENST00000399903 ZNF143P52747 638 aaPredicted RBP17.25■□□□□ 0.35
PTPRA-205ENST00000399903 ZNF667Q5HYK9 610 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 OTUD3Q5T2D3 398 aaPredicted RBP17.25■□□□□ 0.35
PTPRA-205ENST00000399903 PIWIL3Q7Z3Z3 882 aaKnown RBP17.25■□□□□ 0.35
PTPRA-205ENST00000399903 SCUBE3Q8IX30 993 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 OR52K1Q8NGK4 314 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 CERS2Q96G23 380 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 DGCR6LQ9BY27 220 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 CDT1Q9H211 546 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 CNTN6Q9UQ52 1028 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 ITGB3P05106 788 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 TCEA1P23193 301 aaKnown RBP17.25■□□□□ 0.35
PTPRA-205ENST00000399903 ACADVLP49748 655 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 TAZQ16635 292 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 FAM183BPQ6ZVS7 135 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 MCUQ8NE86 351 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 ZMAT2Q96NC0 199 aaKnown RBP17.25■□□□□ 0.35
PTPRA-205ENST00000399903 ANKRD60Q9BZ19 345 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 PIF1Q9H611 641 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 POU2F3Q9UKI9 436 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 TMEM98Q9Y2Y6 226 aa17.25■□□□□ 0.35
PTPRA-205ENST00000399903 CXCL11O14625 94 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 GRID2O43424 1007 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 TSPAN8P19075 237 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 GABRB3P28472 473 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 SDC4P31431 198 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 GNL1P36915 607 aaPredicted RBP17.24■□□□□ 0.35
PTPRA-205ENST00000399903 PLK1P53350 603 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 PDK2Q15119 407 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 MOGQ16653 247 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 KIZQ2M2Z5 673 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 PRR23BQ6ZRT6 265 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 KCTD4Q8WVF5 259 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 CCDC138Q96M89 665 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 TMEM134Q9H6X4 195 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 IARS2Q9NSE4 1012 aaKnown RBP17.24■□□□□ 0.35
PTPRA-205ENST00000399903 KCNK1O00180 336 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 PIGRP01833 764 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 TPTEP56180 551 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 POU5F1BQ06416 359 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 MERTKQ12866 999 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 NFATC3Q12968 1075 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 FASTKQ14296 549 aaKnown RBP17.24■□□□□ 0.35
PTPRA-205ENST00000399903 TTLL4Q14679 1199 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 NHSL2Q5HYW2 709 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 CAPSLQ8WWF8 208 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 TANKQ92844 425 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 TCF12Q99081 682 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 BEGAINQ9BUH8 593 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 CPSF3Q9UKF6 684 aaKnown RBP17.24■□□□□ 0.35
PTPRA-205ENST00000399903 PCDHGA7Q9Y5G6 932 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 PTPRFP10586 1907 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 MAN1A2O60476 641 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 BAIAP3O94812 1187 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 TNNC2P02585 160 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 ALDH2P05091 517 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 MATN1P21941 496 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 LSM3P62310 102 aaKnown RBP17.24■□□□□ 0.35
PTPRA-205ENST00000399903 NIPAL4Q0D2K0 466 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 USP10Q14694 798 aaKnown RBP17.24■□□□□ 0.35
PTPRA-205ENST00000399903 RNF19BQ6ZMZ0 732 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 PID1Q7Z2X4 250 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 EXOC8Q8IYI6 725 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 CHPT1Q8WUD6 406 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 TFAP2CQ92754 450 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 MFSD3Q96ES6 412 aa17.24■□□□□ 0.35
PTPRA-205ENST00000399903 OAZ3Q9UMX2 235 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms