RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 PRSS55Q6UWB4 352 aaPredicted RBP11.45□□□□□ -0.58
TTC28-201ENST00000397906 RAVER1Q8IY67 606 aaKnown RBP11.45□□□□□ -0.58
TTC28-201ENST00000397906 SGTAO43765 313 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 NBNO60934 754 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 URADA6NGE7 173 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 KCNH1O95259 989 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 CCND1P24385 295 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 MAPK8P45983 427 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 ILDR1Q86SU0 546 aaPredicted RBP11.45□□□□□ -0.58
TTC28-201ENST00000397906 PHLPP1O60346 1717 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 ERBB2P04626 1255 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 HSPA13P48723 471 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 CCL14Q16627 93 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 NSMCE2Q96MF7 247 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 NUP107P57740 925 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 TMEM79Q9BSE2 394 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 H3BMM5 538 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 TRIM13O60858 407 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 OR6B1O95007 311 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 GRM5P41594 1212 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 CYP4F2P78329 520 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 ECM1Q16610 540 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 KDM7AQ6ZMT4 941 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 UNC5AQ6ZN44 842 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 TMEM237Q96Q45 408 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 PIPSLA2A3N6 862 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 SMPD1P17405 629 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 RPL4P36578 427 aaKnown RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 PTPRNQ16849 979 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 HYIQ5T013 277 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 FCRL2Q96LA5 508 aaPredicted RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 TTLL2Q9BWV7 592 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 SEMA6AQ9H2E6 1030 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 OSER1Q9NX31 292 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 SNX6Q9UNH7 406 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 RRP1BQ14684 758 aaKnown RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 PAPD7Q5XG87 772 aaKnown RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 EPS8L1Q8TE68 723 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 MYO19Q96H55 970 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 NINJ2Q9NZG7 142 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 STARD13Q9Y3M8 1113 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 DCXO43602 365 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 ZNF24P17028 368 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 PACS1Q6VY07 963 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 EQTNQ9NQ60 294 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 ZNF232Q9UNY5 417 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 ADGRB1O14514 1584 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 PAPSS1O43252 624 aaPredicted RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 JAK1P23458 1154 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 CTBP1Q13363 440 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 TAF8Q7Z7C8 310 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 CIR1Q86X95 450 aaPredicted RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 ST13P5Q8NFI4 369 aaPredicted RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 OR52K2Q8NGK3 314 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 STAG3L4Q8TBR4 150 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 GALNT8Q9NY28 637 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 SYNPO2Q9UMS6 1093 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 ZNF510Q9Y2H8 683 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 AFDNP55196 1824 aaKnown RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 ARL5CA6NH57 179 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 TUSC3Q13454 348 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 FAM45BPQ6NSW5 357 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 KYQ8NBH2 561 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 MAML3Q96JK9 1138 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 SLC40A1Q9NP59 571 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 FGF19O95750 216 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 LTA4HP09960 611 aaKnown RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 RPL7AP62424 266 aaKnown RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 LRRC73Q5JTD7 316 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 C11orf88Q6PI97 169 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 KATNAL2Q8IYT4 538 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 FAM45AQ8TCE6 357 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 TRIM43BA6NCK2 446 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 KPNA5O15131 536 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 AVILO75366 819 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 MTAPQ13126 283 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 SF1Q15637 639 aaKnown RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 IL17AQ16552 155 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 ZBTB49Q6ZSB9 765 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 B3GALT6Q96L58 329 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 CLDND1Q9NY35 253 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 CROTQ9UKG9 612 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 CHKBQ9Y259 395 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 CYP3A7-CYP3A51PA0A087WV96 503 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 PEX11AO75192 247 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 CYP3A7P24462 503 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 CXCR2P25025 360 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 RNFT2Q96EX2 444 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 HDHD2Q9H0R4 259 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 CACNG4Q9UBN1 327 aa11.44□□□□□ -0.58
TTC28-201ENST00000397906 ARIH1Q9Y4X5 557 aaPredicted RBP11.44□□□□□ -0.58
TTC28-201ENST00000397906 PDE5AO76074 875 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 VHLP40337 213 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 GPR141Q7Z602 305 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 JSRP1Q96MG2 331 aaPredicted RBP11.43□□□□□ -0.58
TTC28-201ENST00000397906 PSMB9P28065 219 aa11.43□□□□□ -0.58
TTC28-201ENST00000397906 QRFPRQ96P65 431 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms