RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 GNPTGQ9UJJ9 305 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 NARSO43776 548 aaKnown RBP12.44□□□□□ -0.42
SMU1-201ENST00000397149 F9P00740 461 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 FXR1P51114 621 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMU1-201ENST00000397149 ADGRG6Q86SQ4 1221 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 MPP5Q8N3R9 675 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 AMER2Q8N7J2 671 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 C11orf65Q8NCR3 313 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 Q96MT0 163 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 DPP7Q9UHL4 492 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 TBX20Q9UMR3 447 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 BTRCQ9Y297 605 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 IFT52Q9Y366 437 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 OR14I1A6ND48 311 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 ARSHQ5FYA8 562 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 XKR6Q5GH73 641 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 RBM23Q86U06 439 aaKnown RBP12.44□□□□□ -0.42
SMU1-201ENST00000397149 PIK3R3Q92569 461 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 ALG9Q9H6U8 611 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 ELOVL2Q9NXB9 296 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 CNOT6Q9ULM6 557 aaKnown RBP12.44□□□□□ -0.42
SMU1-201ENST00000397149 FFAR2O15552 330 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 HOXA2O43364 376 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 HMGCRP04035 888 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 TUBG1P23258 451 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 RTL4Q6ZR62 310 aa12.44□□□□□ -0.42
SMU1-201ENST00000397149 MRPL9Q9BYD2 267 aaKnown RBP12.44□□□□□ -0.42
SMU1-201ENST00000397149 PDGFDQ9GZP0 370 aaPredicted RBP12.44□□□□□ -0.42
SMU1-201ENST00000397149 TRAPPC8Q9Y2L5 1435 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 PROCP04070 461 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 ATP5BP06576 529 aaKnown RBP12.43□□□□□ -0.42
SMU1-201ENST00000397149 TMEM253P0C7T8 217 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 SRGNP10124 158 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 PIK3CGP48736 1102 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 VLDLRP98155 873 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 PDK2Q15119 407 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 AADACL4Q5VUY2 407 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 SLC41A1Q8IVJ1 513 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 PRSS58Q8IYP2 241 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 ZNF567Q8N184 647 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 ZNF350Q9GZX5 532 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 STARD13Q9Y3M8 1113 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 KDM4BO94953 1096 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 MSX1P28360 303 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 INTS11Q5TA45 600 aaKnown RBP12.43□□□□□ -0.42
SMU1-201ENST00000397149 GPR107Q5VW38 600 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 ALLCQ8N6M5 410 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 OR4A15Q8NGL6 344 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 MYDGFQ969H8 173 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 TBL1YQ9BQ87 522 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 CPA4Q9UI42 421 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 A0A0A6YYK5 440 aaPredicted RBP12.43□□□□□ -0.42
SMU1-201ENST00000397149 QSOX1O00391 747 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 CAPGP40121 348 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 CLCA4Q14CN2 919 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 SLC26A11Q86WA9 606 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 GHDCQ8N2G8 530 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 ZFP28Q8NHY6 868 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 TM6SF2Q9BZW4 377 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 EHD1Q9H4M9 534 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 MID1O15344 667 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 XYLBO75191 536 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 AP2A2O94973 939 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 CYP17A1P05093 508 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 VDRP11473 427 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 FUT4P22083 530 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 ENPEPQ07075 957 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 TLR1Q15399 786 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 CRTC3Q6UUV7 619 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 TMPRSS9Q7Z410 1059 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 ARRDC4Q8NCT1 418 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 COQ8AQ8NI60 647 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 TTYH1Q9H313 450 aaPredicted RBP12.43□□□□□ -0.42
SMU1-201ENST00000397149 CATSPERZQ9NTU4 200 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 TBX22Q9Y458 520 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 ERVV-1B6SEH8 477 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 KCNK1O00180 336 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 GATBO75879 557 aaKnown RBP12.43□□□□□ -0.42
SMU1-201ENST00000397149 ZNF16P17020 682 aaPredicted RBP12.43□□□□□ -0.42
SMU1-201ENST00000397149 NELFEP18615 380 aaKnown RBP12.43□□□□□ -0.42
SMU1-201ENST00000397149 AMPD1P23109 780 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 ME2P23368 584 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 OVOS1Q6IE37 1185 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 SAMD7Q7Z3H4 446 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 OR8H1Q8NGG4 311 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 TMEM39BQ9GZU3 492 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 MROH8Q9H579 483 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 PCDHB5Q9Y5E4 795 aa12.43□□□□□ -0.42
SMU1-201ENST00000397149 SCAMP1O15126 338 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 PTPN4P29074 926 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 DEFA5Q01523 94 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 NECTIN1Q15223 517 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 GALNT5Q7Z7M9 940 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 C7orf57Q8NEG2 295 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 TPCN2Q8NHX9 752 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 BPIFA3Q9BQP9 254 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 MXRA8Q9BRK3 442 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 U3KQV3 271 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 ERBB4Q15303 1308 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 NUP160Q12769 1436 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms