RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 HNRNPCL4P0DMR1 293 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 TYK2P29597 1187 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 HNF1BP35680 557 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 ERVK-8P63133 956 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 NIPAL4Q0D2K0 466 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 ALCAMQ13740 583 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 FASTKD3Q14CZ7 662 aaKnown RBP8.51□□□□□ -1.05
NDE1-202ENST00000396355 TOMM20Q15388 145 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 FAXCQ5TGI0 409 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 B3GNT9Q6UX72 402 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 ZNF720Q7Z2F6 126 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 ALLCQ8N6M5 410 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 FAM71DQ8N9W8 422 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 FAF2Q96CS3 445 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 PPP1R2P1Q96PQ5 205 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 GFM1Q96RP9 751 aaKnown RBP8.51□□□□□ -1.05
NDE1-202ENST00000396355 TMEM117Q9H0C3 514 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 AGPAT3Q9NRZ7 376 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 DMAC2Q9NW81 257 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 THG1LQ9NWX6 298 aaKnown RBP8.51□□□□□ -1.05
NDE1-202ENST00000396355 MLXQ9UH92 298 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 ERGIC3Q9Y282 383 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 TTLL3Q9Y4R7 772 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 PSME4Q14997 1843 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 LOXHD1Q8IVV2 1947 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 ANKRD12Q6UB98 2062 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 CCDC162PA2VCL2 907 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 H3BNX3 289 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 EIF3DO15371 548 aaKnown RBP eCLIP8.51□□□□□ -1.056e-8■□□□□ 10.9
NDE1-202ENST00000396355 MAP3K6O95382 1288 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 GTF2E2P29084 291 aaKnown RBP8.51□□□□□ -1.05
NDE1-202ENST00000396355 QARSP47897 775 aaKnown RBP8.51□□□□□ -1.05
NDE1-202ENST00000396355 ZBED5Q49AG3 693 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 MFSD5Q6N075 450 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 SCYL2Q6P3W7 929 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 DARS2Q6PI48 645 aaKnown RBP8.51□□□□□ -1.05
NDE1-202ENST00000396355 SEC14L1Q92503 715 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 SEMA4DQ92854 862 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 ALKBH8Q96BT7 664 aaKnown RBP8.51□□□□□ -1.05
NDE1-202ENST00000396355 TMEM121Q9BTD3 319 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 PCDHGB4Q9UN71 923 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 PCDHGB5Q9Y5G0 923 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 SQORQ9Y6N5 450 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 A0A0A6YYK5 440 aaPredicted RBP8.51□□□□□ -1.05
NDE1-202ENST00000396355 PLD2O14939 933 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 TRIM24O15164 1050 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 GRIA3P42263 894 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 XIAPP98170 497 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 TRAF3Q13114 568 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 FUT11Q495W5 492 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 ALFQ53S48 1182 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 BROXQ5VW32 411 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 SEL1L3Q68CR1 1132 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 FRMD7Q6ZUT3 714 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 STX12Q86Y82 276 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 RFX6Q8HWS3 928 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 ESX1Q8N693 406 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 SNAPC3Q92966 411 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 ELMO3Q96BJ8 720 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 EFHD2Q96C19 240 aaPredicted RBP8.51□□□□□ -1.05
NDE1-202ENST00000396355 NXNL1Q96CM4 212 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 PKP2Q99959 881 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 STRA6Q9BX79 667 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 MKRN2Q9H000 416 aaKnown RBP8.51□□□□□ -1.05
NDE1-202ENST00000396355 SLC38A10Q9HBR0 1119 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 FBXO28Q9NVF7 368 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 BAIAP2Q9UQB8 552 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 NCANO14594 1321 aa8.51□□□□□ -1.05
NDE1-202ENST00000396355 WWP2O00308 870 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 CDK2AP1O14519 115 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 EXTL3O43909 919 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 SSX5O60225 188 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 CLPXO76031 633 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 PSMC2P35998 433 aaKnown RBP8.5□□□□□ -1.05
NDE1-202ENST00000396355 OPRL1P41146 370 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 GCLMP48507 274 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 EMP3P54852 163 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 BTN1A1Q13410 526 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 TYSND1Q2T9J0 566 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 PLEKHG4Q58EX7 1191 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 KCNT2Q6UVM3 1135 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 DPP9Q86TI2 863 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 ZDHHC14Q8IZN3 488 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 MTMR14Q8NCE2 650 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 SLC20A1Q8WUM9 679 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 ATL1Q8WXF7 558 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 NCSTNQ92542 709 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 RORBQ92753 470 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 C11orf70Q9BRQ4 267 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 MRIQ9BWK5 157 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 OSBPL11Q9BXB4 747 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 CLEC4MQ9H2X3 399 aaPredicted RBP8.5□□□□□ -1.05
NDE1-202ENST00000396355 SOX17Q9H6I2 414 aaPredicted RBP8.5□□□□□ -1.05
NDE1-202ENST00000396355 ZDHHC18Q9NUE0 388 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 GRHL1Q9NZI5 618 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 UBA2Q9UBT2 640 aaPredicted RBP8.5□□□□□ -1.05
NDE1-202ENST00000396355 KLQ9UEF7 1012 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 ATP8B3O60423 1300 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 CCDC78A2IDD5 438 aa8.5□□□□□ -1.05
NDE1-202ENST00000396355 STX16-NPEPL1H3BU86 382 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms