RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 ASAH2Q9NR71 780 aa19.27■□□□□ 0.68
CLDND1-203ENST00000394181 TRANK1O15050 2925 aa19.27■□□□□ 0.68
CLDND1-203ENST00000394181 LOC285095A0A1B0GVY8 99 aa19.27■□□□□ 0.68
CLDND1-203ENST00000394181 SERPINH1P50454 418 aaKnown RBP19.27■□□□□ 0.68
CLDND1-203ENST00000394181 PGGT1BP53609 377 aa19.27■□□□□ 0.68
CLDND1-203ENST00000394181 NAB1Q13506 487 aa19.27■□□□□ 0.68
CLDND1-203ENST00000394181 SEPT7Q16181 437 aaKnown RBP19.27■□□□□ 0.68
CLDND1-203ENST00000394181 ZNF697Q5TEC3 545 aa19.27■□□□□ 0.68
CLDND1-203ENST00000394181 GKAP1Q5VSY0 366 aaPredicted RBP19.27■□□□□ 0.68
CLDND1-203ENST00000394181 SHKBP1Q8TBC3 707 aa19.27■□□□□ 0.68
CLDND1-203ENST00000394181 FEM1AQ9BSK4 669 aa19.27■□□□□ 0.68
CLDND1-203ENST00000394181 RETREG1Q9H6L5 497 aa19.27■□□□□ 0.68
CLDND1-203ENST00000394181 TREX1Q9NSU2 369 aa19.27■□□□□ 0.68
CLDND1-203ENST00000394181 TXNDC16Q9P2K2 825 aa19.27■□□□□ 0.68
CLDND1-203ENST00000394181 DNMT3BQ9UBC3 853 aaKnown RBP19.27■□□□□ 0.68
CLDND1-203ENST00000394181 MTO1Q9Y2Z2 717 aaKnown RBP19.27■□□□□ 0.68
CLDND1-203ENST00000394181 PLLPQ9Y342 182 aa19.27■□□□□ 0.68
CLDND1-203ENST00000394181 KCTD3Q9Y597 815 aa19.27■□□□□ 0.68
CLDND1-203ENST00000394181 MOSPD3O75425 235 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 DHRS4L1P0CG22 281 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 GABRB3P28472 473 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 NTHL1P78549 312 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 PDE1CQ14123 709 aaPredicted RBP19.26■□□□□ 0.67
CLDND1-203ENST00000394181 GALNT3Q14435 633 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 FSTL4Q6MZW2 842 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 ZNF449Q6P9G9 518 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 TPGS1Q6ZTW0 290 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 CMC1Q7Z7K0 106 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 DENND6AQ8IWF6 608 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 DCLK2Q8N568 766 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 ZNF75CPQ92670 426 aaPredicted RBP19.26■□□□□ 0.67
CLDND1-203ENST00000394181 RBBP8Q99708 897 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 MGME1Q9BQP7 344 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 CAB39LQ9H9S4 337 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 TRAV19A0A0A6YYK7 116 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 LEFTY2O00292 366 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 CCL22O00626 93 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 PIRTP0C851 137 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 CNTFP26441 200 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 SCNN1BP51168 640 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 PDE1BQ01064 536 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 CTBP1Q13363 440 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 SLC5A9Q2M3M2 681 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 GRTP1Q5TC63 336 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 HTR3DQ70Z44 454 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 THOC1Q96FV9 657 aaKnown RBP19.26■□□□□ 0.67
CLDND1-203ENST00000394181 SMIM14Q96QK8 99 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 PSKH2Q96QS6 385 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 MCMBPQ9BTE3 642 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 CINPQ9BW66 212 aaPredicted RBP19.26■□□□□ 0.67
CLDND1-203ENST00000394181 SEPT3Q9UH03 358 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 OR51B4Q9Y5P0 310 aa19.26■□□□□ 0.67
CLDND1-203ENST00000394181 ZMPSTE24O75844 475 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 LUC7L3O95232 432 aaKnown RBP19.25■□□□□ 0.67
CLDND1-203ENST00000394181 LATS1O95835 1130 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 CA3P07451 260 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 CDC25CP30307 473 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 CSKP41240 450 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 IFT88Q13099 833 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 TEAD2Q15562 447 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 DLG2Q15700 870 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 C16orf46Q6P387 395 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 FAM217AQ8IXS0 508 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 HJURPQ8NCD3 748 aaPredicted RBP19.25■□□□□ 0.67
CLDND1-203ENST00000394181 DDI1Q8WTU0 396 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 MECRQ9BV79 373 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 PRKAG3Q9UGI9 489 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 SH3BP1Q9Y3L3 701 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 MT-CO1P00395 513 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 MPP1Q00013 466 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 CDK18Q07002 472 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 PTPRCAPQ14761 206 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 GPR158Q5T848 1215 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 PDPK2PQ6A1A2 396 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 ALG1LQ6GMV1 187 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 RBM23Q86U06 439 aaKnown RBP19.25■□□□□ 0.67
CLDND1-203ENST00000394181 CCDC117Q8IWD4 279 aaPredicted RBP19.25■□□□□ 0.67
CLDND1-203ENST00000394181 CACNA2D3Q8IZS8 1091 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 APCDD1Q8J025 514 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 TDRD5Q8NAT2 981 aaKnown RBP19.25■□□□□ 0.67
CLDND1-203ENST00000394181 ARMC2Q8NEN0 867 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 ALG14Q96F25 216 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 HCFC2Q9Y5Z7 792 aa19.25■□□□□ 0.67
CLDND1-203ENST00000394181 BUD23O43709 281 aaKnown RBP19.24■□□□□ 0.67
CLDND1-203ENST00000394181 SNX3O60493 162 aa19.24■□□□□ 0.67
CLDND1-203ENST00000394181 CLASP2O75122 1294 aaKnown RBP19.24■□□□□ 0.67
CLDND1-203ENST00000394181 AHSGP02765 367 aa19.24■□□□□ 0.67
CLDND1-203ENST00000394181 CR2P20023 1033 aa19.24■□□□□ 0.67
CLDND1-203ENST00000394181 CRHR1P34998 444 aa19.24■□□□□ 0.67
CLDND1-203ENST00000394181 IRX4P78413 519 aa19.24■□□□□ 0.67
CLDND1-203ENST00000394181 C6orf89Q6UWU4 347 aa19.24■□□□□ 0.67
CLDND1-203ENST00000394181 SPNS2Q8IVW8 549 aa19.24■□□□□ 0.67
CLDND1-203ENST00000394181 LRRC8CQ8TDW0 803 aa19.24■□□□□ 0.67
CLDND1-203ENST00000394181 LBHD1Q9BQE6 289 aaPredicted RBP19.24■□□□□ 0.67
CLDND1-203ENST00000394181 PITPNM3Q9BZ71 974 aa19.24■□□□□ 0.67
CLDND1-203ENST00000394181 IQCGQ9H095 443 aaKnown RBP19.24■□□□□ 0.67
CLDND1-203ENST00000394181 CERS4Q9HA82 394 aa19.24■□□□□ 0.67
CLDND1-203ENST00000394181 GGT7Q9UJ14 662 aa19.24■□□□□ 0.67
CLDND1-203ENST00000394181 VPS28Q9UK41 221 aa19.24■□□□□ 0.67
CLDND1-203ENST00000394181 LSM7Q9UK45 103 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms